Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE4Q96A23 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CPNE4Q96A23 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE4Q96A23 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE4Q96A23 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE4Q96A23 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE4Q96A23 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE4Q96A23 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE4Q96A23 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE4Q96A23 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 AC018445.3-201ENST00000624177 1945 ntBASIC16.67■□□□□ 0.26
CPNE4Q96A23 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.67■□□□□ 0.26
CPNE4Q96A23 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CPNE4Q96A23 AC104076.2-201ENST00000448912 469 ntBASIC16.67■□□□□ 0.26
CPNE4Q96A23 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.67■□□□□ 0.26
CPNE4Q96A23 DUX4L26-201ENST00000489078 1255 ntBASIC16.67■□□□□ 0.26
CPNE4Q96A23 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.67■□□□□ 0.26
CPNE4Q96A23 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE4Q96A23 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CPNE4Q96A23 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CPNE4Q96A23 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE4Q96A23 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CPNE4Q96A23 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CPNE4Q96A23 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CPNE4Q96A23 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE4Q96A23 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE4Q96A23 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CPNE4Q96A23 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE4Q96A23 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE4Q96A23 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.66■□□□□ 0.26
CPNE4Q96A23 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE4Q96A23 TSPY5P-201ENST00000426936 936 ntBASIC16.66■□□□□ 0.26
CPNE4Q96A23 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.66■□□□□ 0.26
CPNE4Q96A23 HOMER2P1-201ENST00000455653 964 ntBASIC16.66■□□□□ 0.26
CPNE4Q96A23 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE4Q96A23 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.66■□□□□ 0.26
CPNE4Q96A23 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE4Q96A23 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.66■□□□□ 0.26
CPNE4Q96A23 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CPNE4Q96A23 MYC-208ENST00000641036 567 ntBASIC16.66■□□□□ 0.26
CPNE4Q96A23 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE4Q96A23 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE4Q96A23 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE4Q96A23 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE4Q96A23 BX323043.1-201ENST00000641006 1765 ntBASIC16.66■□□□□ 0.26
CPNE4Q96A23 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE4Q96A23 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE4Q96A23 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE4Q96A23 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE4Q96A23 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.65■□□□□ 0.26
CPNE4Q96A23 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.65■□□□□ 0.26
CPNE4Q96A23 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE4Q96A23 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CPNE4Q96A23 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.65■□□□□ 0.26
CPNE4Q96A23 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE4Q96A23 AC092647.4-201ENST00000457211 535 ntBASIC16.65■□□□□ 0.26
CPNE4Q96A23 AC034232.1-201ENST00000506026 1064 ntBASIC16.65■□□□□ 0.26
CPNE4Q96A23 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE4Q96A23 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.65■□□□□ 0.26
CPNE4Q96A23 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.65■□□□□ 0.26
CPNE4Q96A23 AC011558.1-201ENST00000623459 338 ntBASIC16.65■□□□□ 0.26
CPNE4Q96A23 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE4Q96A23 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CPNE4Q96A23 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CPNE4Q96A23 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms