Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 AL355075.4-201ENST00000554988 638 ntBASIC18.04■□□□□ 0.48
NCLNQ969V3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCLNQ969V3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.04■□□□□ 0.48
NCLNQ969V3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLNQ969V3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.04■□□□□ 0.48
NCLNQ969V3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLNQ969V3 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.04■□□□□ 0.48
NCLNQ969V3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLNQ969V3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLNQ969V3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLNQ969V3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCLNQ969V3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NCLNQ969V3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCLNQ969V3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLNQ969V3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NCLNQ969V3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.03■□□□□ 0.48
NCLNQ969V3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCLNQ969V3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCLNQ969V3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCLNQ969V3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCLNQ969V3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.03■□□□□ 0.48
NCLNQ969V3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.03■□□□□ 0.48
NCLNQ969V3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.03■□□□□ 0.48
NCLNQ969V3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCLNQ969V3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCLNQ969V3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCLNQ969V3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCLNQ969V3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.03■□□□□ 0.48
NCLNQ969V3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.03■□□□□ 0.48
NCLNQ969V3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCLNQ969V3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.03■□□□□ 0.48
NCLNQ969V3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCLNQ969V3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCLNQ969V3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.03■□□□□ 0.48
NCLNQ969V3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.03■□□□□ 0.48
NCLNQ969V3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
NCLNQ969V3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.03■□□□□ 0.48
NCLNQ969V3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NCLNQ969V3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.03■□□□□ 0.48
NCLNQ969V3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCLNQ969V3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCLNQ969V3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NCLNQ969V3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
NCLNQ969V3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.02■□□□□ 0.48
NCLNQ969V3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.02■□□□□ 0.48
NCLNQ969V3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCLNQ969V3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCLNQ969V3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCLNQ969V3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.02■□□□□ 0.48
NCLNQ969V3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCLNQ969V3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCLNQ969V3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCLNQ969V3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCLNQ969V3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NCLNQ969V3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.02■□□□□ 0.48
NCLNQ969V3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCLNQ969V3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
NCLNQ969V3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.02■□□□□ 0.48
NCLNQ969V3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCLNQ969V3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.02■□□□□ 0.48
NCLNQ969V3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.02■□□□□ 0.48
NCLNQ969V3 AC026271.3-201ENST00000571884 352 ntBASIC18.02■□□□□ 0.48
NCLNQ969V3 REXO1L10P-201ENST00000615707 1290 ntBASIC18.02■□□□□ 0.48
NCLNQ969V3 REXO1L12P-201ENST00000622156 912 ntBASIC18.02■□□□□ 0.48
NCLNQ969V3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCLNQ969V3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCLNQ969V3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
NCLNQ969V3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.02■□□□□ 0.47
NCLNQ969V3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
NCLNQ969V3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCLNQ969V3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCLNQ969V3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCLNQ969V3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NCLNQ969V3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCLNQ969V3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.01■□□□□ 0.47
NCLNQ969V3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCLNQ969V3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.01■□□□□ 0.47
NCLNQ969V3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NCLNQ969V3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCLNQ969V3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCLNQ969V3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.01■□□□□ 0.47
NCLNQ969V3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.01■□□□□ 0.47
NCLNQ969V3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.01■□□□□ 0.47
NCLNQ969V3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.01■□□□□ 0.47
NCLNQ969V3 TSPY15P-201ENST00000457163 923 ntBASIC18.01■□□□□ 0.47
NCLNQ969V3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.01■□□□□ 0.47
NCLNQ969V3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
NCLNQ969V3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.01■□□□□ 0.47
NCLNQ969V3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NCLNQ969V3 AL160286.2-201ENST00000567150 934 ntBASIC18.01■□□□□ 0.47
NCLNQ969V3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.01■□□□□ 0.47
NCLNQ969V3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCLNQ969V3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.01■□□□□ 0.47
NCLNQ969V3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.01■□□□□ 0.47
NCLNQ969V3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCLNQ969V3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCLNQ969V3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.01■□□□□ 0.47
NCLNQ969V3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NCLNQ969V3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.01■□□□□ 0.47
NCLNQ969V3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms