Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
AP3S1Q92572 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.38■□□□□ 0.21
AP3S1Q92572 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.38■□□□□ 0.21
AP3S1Q92572 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.38■□□□□ 0.21
AP3S1Q92572 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.38■□□□□ 0.21
AP3S1Q92572 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.38■□□□□ 0.21
AP3S1Q92572 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
AP3S1Q92572 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
AP3S1Q92572 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
AP3S1Q92572 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
AP3S1Q92572 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
AP3S1Q92572 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 REXO1L9P-201ENST00000604264 2108 ntBASIC16.37■□□□□ 0.21
AP3S1Q92572 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.37■□□□□ 0.21
AP3S1Q92572 AC112777.1-201ENST00000540175 1423 ntBASIC16.37■□□□□ 0.21
AP3S1Q92572 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.37■□□□□ 0.21
AP3S1Q92572 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.37■□□□□ 0.21
AP3S1Q92572 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
AP3S1Q92572 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
AP3S1Q92572 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.37■□□□□ 0.21
AP3S1Q92572 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.37■□□□□ 0.21
AP3S1Q92572 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
AP3S1Q92572 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.37■□□□□ 0.21
AP3S1Q92572 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.37■□□□□ 0.21
AP3S1Q92572 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.37■□□□□ 0.21
AP3S1Q92572 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
AP3S1Q92572 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.37■□□□□ 0.21
AP3S1Q92572 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
AP3S1Q92572 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3S1Q92572 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.36■□□□□ 0.21
AP3S1Q92572 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.36■□□□□ 0.21
AP3S1Q92572 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.36■□□□□ 0.21
AP3S1Q92572 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
AP3S1Q92572 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S1Q92572 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S1Q92572 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S1Q92572 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S1Q92572 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S1Q92572 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S1Q92572 AP006587.1-201ENST00000534129 1502 ntBASIC16.36■□□□□ 0.21
AP3S1Q92572 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S1Q92572 AL499627.1-201ENST00000569373 2188 ntBASIC16.36■□□□□ 0.21
AP3S1Q92572 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
AP3S1Q92572 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
AP3S1Q92572 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
AP3S1Q92572 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.36■□□□□ 0.21
AP3S1Q92572 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.36■□□□□ 0.21
AP3S1Q92572 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.36■□□□□ 0.21
AP3S1Q92572 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.36■□□□□ 0.21
AP3S1Q92572 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
AP3S1Q92572 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S1Q92572 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S1Q92572 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
AP3S1Q92572 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S1Q92572 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.36■□□□□ 0.21
AP3S1Q92572 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.36■□□□□ 0.21
AP3S1Q92572 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.36■□□□□ 0.21
AP3S1Q92572 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S1Q92572 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.36■□□□□ 0.21
AP3S1Q92572 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.36■□□□□ 0.21
AP3S1Q92572 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S1Q92572 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S1Q92572 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
AP3S1Q92572 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.35■□□□□ 0.21
AP3S1Q92572 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
AP3S1Q92572 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.35■□□□□ 0.21
AP3S1Q92572 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S1Q92572 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S1Q92572 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms