Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ATG4AQ8WYN0 B3GAT3P1-201ENST00000471720 806 ntBASIC19.28■□□□□ 0.68
ATG4AQ8WYN0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.28■□□□□ 0.68
ATG4AQ8WYN0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.28■□□□□ 0.68
ATG4AQ8WYN0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATG4AQ8WYN0 ESPNP-201ENST00000270691 2015 ntBASIC19.28■□□□□ 0.68
ATG4AQ8WYN0 AC008556.1-201ENST00000610908 2040 ntBASIC19.28■□□□□ 0.68
ATG4AQ8WYN0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATG4AQ8WYN0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ATG4AQ8WYN0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATG4AQ8WYN0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.28■□□□□ 0.68
ATG4AQ8WYN0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATG4AQ8WYN0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 MESTP1-201ENST00000404287 994 ntBASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 AC073195.1-201ENST00000607241 877 ntBASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 MIR6786-201ENST00000616843 113 ntBASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 AC008622.2-201ENST00000617006 1229 ntBASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 AC008764.6-201ENST00000595909 2069 ntBASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.27■□□□□ 0.68
ATG4AQ8WYN0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATG4AQ8WYN0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ATG4AQ8WYN0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.27■□□□□ 0.67
ATG4AQ8WYN0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATG4AQ8WYN0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
ATG4AQ8WYN0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATG4AQ8WYN0 AC093677.2-201ENST00000600169 1863 ntBASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 RARRES2P10-201ENST00000564312 460 ntBASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 MYC-208ENST00000641036 567 ntBASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 AC099343.3-201ENST00000605834 2503 ntBASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.26■□□□□ 0.67
ATG4AQ8WYN0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 FZD10-202ENST00000539839 3282 ntBASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
ATG4AQ8WYN0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms