Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.07
MBD3L1Q8WWY6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MBD3L1Q8WWY6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
MBD3L1Q8WWY6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.58□□□□□ -0.07
MBD3L1Q8WWY6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.58□□□□□ -0.07
MBD3L1Q8WWY6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MBD3L1Q8WWY6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.58□□□□□ -0.07
MBD3L1Q8WWY6 AC068338.2-201ENST00000563278 1430 ntBASIC14.58□□□□□ -0.07
MBD3L1Q8WWY6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.58□□□□□ -0.07
MBD3L1Q8WWY6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
MBD3L1Q8WWY6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
MBD3L1Q8WWY6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 AC073210.2-201ENST00000430369 194 ntBASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L1Q8WWY6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 TSPY23P-201ENST00000440136 739 ntBASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 AL139384.1-201ENST00000612143 3047 ntBASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L1Q8WWY6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 LINC00602-201ENST00000629776 2065 ntBASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 GPX1P1-201ENST00000388829 606 ntBASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 KRT18P16-201ENST00000510337 1294 ntBASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L1Q8WWY6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms