Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 AC124016.1-201ENST00000609552 612 ntBASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 REXO1L9P-201ENST00000604264 2108 ntBASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC44A1Q8WWI5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC44A1Q8WWI5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SLC44A1Q8WWI5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 AC004951.3-201ENST00000418645 1148 ntBASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 RNA5SP413-201ENST00000516373 109 ntBASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 AL353708.3-201ENST00000610272 989 ntBASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC44A1Q8WWI5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 CKBP1-201ENST00000565489 1086 ntBASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC44A1Q8WWI5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 RPS2P4-201ENST00000476944 856 ntBASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 AC110285.5-201ENST00000611501 352 ntBASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 AL109659.2-201ENST00000606809 1674 ntBASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC44A1Q8WWI5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms