Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 MOK-208ENST00000519058 917 ntTSL 2 BASIC31.76■■■□□ 2.67
TRIM41Q8WV44 PUDP-206ENST00000540122 825 ntTSL 2 BASIC31.76■■■□□ 2.67
TRIM41Q8WV44 GCSHP2-201ENST00000560971 527 ntBASIC31.76■■■□□ 2.67
TRIM41Q8WV44 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC31.76■■■□□ 2.67
TRIM41Q8WV44 MIR3180-5-201ENST00000583743 153 ntBASIC31.76■■■□□ 2.67
TRIM41Q8WV44 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC31.76■■■□□ 2.67
TRIM41Q8WV44 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
TRIM41Q8WV44 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC31.76■■■□□ 2.67
TRIM41Q8WV44 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TRIM41Q8WV44 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC31.76■■■□□ 2.67
TRIM41Q8WV44 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
TRIM41Q8WV44 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TRIM41Q8WV44 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
TRIM41Q8WV44 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
TRIM41Q8WV44 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC31.76■■■□□ 2.67
TRIM41Q8WV44 AL049812.1-201ENST00000432563 2267 ntBASIC31.75■■■□□ 2.67
TRIM41Q8WV44 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
TRIM41Q8WV44 AC008556.1-201ENST00000610908 2040 ntBASIC31.75■■■□□ 2.67
TRIM41Q8WV44 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
TRIM41Q8WV44 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
TRIM41Q8WV44 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
TRIM41Q8WV44 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC31.75■■■□□ 2.67
TRIM41Q8WV44 KRT8P32-201ENST00000512863 1461 ntBASIC31.75■■■□□ 2.67
TRIM41Q8WV44 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC31.75■■■□□ 2.67
TRIM41Q8WV44 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
TRIM41Q8WV44 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC31.75■■■□□ 2.67
TRIM41Q8WV44 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
TRIM41Q8WV44 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
TRIM41Q8WV44 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
TRIM41Q8WV44 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC31.74■■■□□ 2.67
TRIM41Q8WV44 LBH-203ENST00000404397 543 ntTSL 4 BASIC31.74■■■□□ 2.67
TRIM41Q8WV44 LBH-204ENST00000406087 559 ntTSL 4 BASIC31.74■■■□□ 2.67
TRIM41Q8WV44 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
TRIM41Q8WV44 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC31.74■■■□□ 2.67
TRIM41Q8WV44 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC31.74■■■□□ 2.67
TRIM41Q8WV44 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC31.74■■■□□ 2.67
TRIM41Q8WV44 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC31.74■■■□□ 2.67
TRIM41Q8WV44 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
TRIM41Q8WV44 AL109659.2-201ENST00000606809 1674 ntBASIC31.73■■■□□ 2.67
TRIM41Q8WV44 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
TRIM41Q8WV44 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC31.73■■■□□ 2.67
TRIM41Q8WV44 HBZP1-201ENST00000354915 429 ntBASIC31.73■■■□□ 2.67
TRIM41Q8WV44 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC31.73■■■□□ 2.67
TRIM41Q8WV44 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC31.73■■■□□ 2.67
TRIM41Q8WV44 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC31.73■■■□□ 2.67
TRIM41Q8WV44 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
TRIM41Q8WV44 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
TRIM41Q8WV44 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
TRIM41Q8WV44 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC31.73■■■□□ 2.67
TRIM41Q8WV44 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
TRIM41Q8WV44 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
TRIM41Q8WV44 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
TRIM41Q8WV44 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
TRIM41Q8WV44 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
TRIM41Q8WV44 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
TRIM41Q8WV44 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
TRIM41Q8WV44 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC31.72■■■□□ 2.67
TRIM41Q8WV44 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
TRIM41Q8WV44 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
TRIM41Q8WV44 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC31.72■■■□□ 2.67
TRIM41Q8WV44 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC31.72■■■□□ 2.67
TRIM41Q8WV44 AL353801.3-201ENST00000609898 542 ntBASIC31.72■■■□□ 2.67
TRIM41Q8WV44 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC31.72■■■□□ 2.67
TRIM41Q8WV44 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
TRIM41Q8WV44 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
TRIM41Q8WV44 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC31.72■■■□□ 2.67
TRIM41Q8WV44 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC31.72■■■□□ 2.67
TRIM41Q8WV44 PTGES2-AS1-201ENST00000443493 2100 ntBASIC31.72■■■□□ 2.67
TRIM41Q8WV44 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
TRIM41Q8WV44 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
TRIM41Q8WV44 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
TRIM41Q8WV44 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 AP000523.1-201ENST00000398242 1049 ntBASIC31.71■■■□□ 2.67
TRIM41Q8WV44 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 AC083906.6-201ENST00000641366 219 ntBASIC31.71■■■□□ 2.67
TRIM41Q8WV44 AC079781.4-201ENST00000641908 219 ntBASIC31.71■■■□□ 2.67
TRIM41Q8WV44 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
TRIM41Q8WV44 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 GAD2-202ENST00000376248 680 ntTSL 5 BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms