Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 AL450487.1-201ENST00000426799 995 ntBASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 AC018445.3-201ENST00000624177 1945 ntBASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 KRT8P26-201ENST00000534154 1276 ntBASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 AC092329.2-201ENST00000598402 547 ntBASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3RF2Q8TEC5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3RF2Q8TEC5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 TSPY22P-201ENST00000427496 604 ntBASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 AP002383.4-201ENST00000442518 975 ntBASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 RNF126P1-202ENST00000569893 925 ntBASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 MIR3180-1-201ENST00000580374 94 ntBASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 MIR3180-3-201ENST00000584616 94 ntBASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms