Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 AP003041.3-201ENST00000527151 707 ntBASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 FAM87A-204ENST00000613235 858 ntBASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 AC133561.5-201ENST00000635547 218 ntBASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 INGX-201ENST00000359239 846 ntBASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 AC211429.1-201ENST00000415277 523 ntBASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGCLL1Q8TB92 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 LINC01023-201ENST00000606054 436 ntBASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 AL109659.2-201ENST00000606809 1674 ntBASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HMGCLL1Q8TB92 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 LTB4R2-202ENST00000528054 3092 ntBASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 HMGA1P5-201ENST00000412453 271 ntBASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 AC068587.9-201ENST00000641814 219 ntBASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLL1Q8TB92 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms