Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 AC097493.4-201ENST00000641197 219 ntBASIC20.32■□□□□ 0.84
RDH13Q8NBN7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 AC009113.1-201ENST00000570267 2443 ntBASIC20.31■□□□□ 0.84
RDH13Q8NBN7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 SLC25A3P1-201ENST00000443844 931 ntBASIC20.31■□□□□ 0.84
RDH13Q8NBN7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 HCG11-201ENST00000411553 5696 ntBASIC20.31■□□□□ 0.84
RDH13Q8NBN7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
RDH13Q8NBN7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 AC010203.1-204ENST00000548782 407 ntBASIC20.3■□□□□ 0.84
RDH13Q8NBN7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RDH13Q8NBN7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 LINC01023-201ENST00000606054 436 ntBASIC20.29■□□□□ 0.84
RDH13Q8NBN7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RDH13Q8NBN7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RDH13Q8NBN7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RDH13Q8NBN7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RDH13Q8NBN7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RDH13Q8NBN7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RDH13Q8NBN7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RDH13Q8NBN7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms