Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPSF7Q8N684 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPSF7Q8N684 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
CPSF7Q8N684 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPSF7Q8N684 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPSF7Q8N684 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPSF7Q8N684 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.18■□□□□ 0.5
CPSF7Q8N684 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPSF7Q8N684 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.18■□□□□ 0.5
CPSF7Q8N684 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CPSF7Q8N684 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPSF7Q8N684 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPSF7Q8N684 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPSF7Q8N684 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.17■□□□□ 0.5
CPSF7Q8N684 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CPSF7Q8N684 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.17■□□□□ 0.5
CPSF7Q8N684 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.17■□□□□ 0.5
CPSF7Q8N684 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.17■□□□□ 0.5
CPSF7Q8N684 RARRES2P10-201ENST00000564312 460 ntBASIC18.17■□□□□ 0.5
CPSF7Q8N684 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPSF7Q8N684 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.17■□□□□ 0.5
CPSF7Q8N684 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CPSF7Q8N684 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.17■□□□□ 0.5
CPSF7Q8N684 NBPF21P-201ENST00000425093 1451 ntBASIC18.17■□□□□ 0.5
CPSF7Q8N684 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.17■□□□□ 0.5
CPSF7Q8N684 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CPSF7Q8N684 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CPSF7Q8N684 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.17■□□□□ 0.5
CPSF7Q8N684 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPSF7Q8N684 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPSF7Q8N684 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CPSF7Q8N684 MTMR9LP-203ENST00000426597 1545 ntBASIC18.17■□□□□ 0.5
CPSF7Q8N684 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPSF7Q8N684 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPSF7Q8N684 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPSF7Q8N684 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPSF7Q8N684 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPSF7Q8N684 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.16■□□□□ 0.5
CPSF7Q8N684 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPSF7Q8N684 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPSF7Q8N684 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPSF7Q8N684 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPSF7Q8N684 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPSF7Q8N684 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPSF7Q8N684 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPSF7Q8N684 RCC2P6-201ENST00000526625 1557 ntBASIC18.16■□□□□ 0.5
CPSF7Q8N684 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPSF7Q8N684 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPSF7Q8N684 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.16■□□□□ 0.5
CPSF7Q8N684 LINC00896-202ENST00000609602 2128 ntBASIC18.16■□□□□ 0.5
CPSF7Q8N684 AL499627.1-201ENST00000569373 2188 ntBASIC18.15■□□□□ 0.5
CPSF7Q8N684 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPSF7Q8N684 AC135776.1-201ENST00000319817 2481 ntBASIC18.15■□□□□ 0.5
CPSF7Q8N684 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.15■□□□□ 0.5
CPSF7Q8N684 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CPSF7Q8N684 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPSF7Q8N684 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.15■□□□□ 0.5
CPSF7Q8N684 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPSF7Q8N684 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPSF7Q8N684 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPSF7Q8N684 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPSF7Q8N684 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CPSF7Q8N684 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.15■□□□□ 0.5
CPSF7Q8N684 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.15■□□□□ 0.5
CPSF7Q8N684 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.15■□□□□ 0.5
CPSF7Q8N684 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPSF7Q8N684 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPSF7Q8N684 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CPSF7Q8N684 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.15■□□□□ 0.5
CPSF7Q8N684 AC113410.3-201ENST00000623366 203 ntBASIC18.15■□□□□ 0.5
CPSF7Q8N684 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CPSF7Q8N684 GNAS-203ENST00000306120 1878 ntBASIC18.15■□□□□ 0.5
CPSF7Q8N684 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CPSF7Q8N684 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPSF7Q8N684 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPSF7Q8N684 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.15■□□□□ 0.5
CPSF7Q8N684 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.15■□□□□ 0.5
CPSF7Q8N684 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CPSF7Q8N684 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF7Q8N684 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CPSF7Q8N684 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF7Q8N684 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms