Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATPAF2Q8N5M1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 AP000593.1-201ENST00000393668 712 ntBASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 KRT18P23-201ENST00000435622 1283 ntBASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 SLC25A3P1-201ENST00000443844 931 ntBASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF2Q8N5M1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
ATPAF2Q8N5M1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATPAF2Q8N5M1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
ATPAF2Q8N5M1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATPAF2Q8N5M1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATPAF2Q8N5M1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 AC009947.2-201ENST00000444014 672 ntBASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 AC097493.4-201ENST00000641197 219 ntBASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF2Q8N5M1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATPAF2Q8N5M1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATPAF2Q8N5M1 HOXB1-202ENST00000577092 1414 ntBASIC19■□□□□ 0.63
ATPAF2Q8N5M1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
ATPAF2Q8N5M1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATPAF2Q8N5M1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATPAF2Q8N5M1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19■□□□□ 0.63
ATPAF2Q8N5M1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATPAF2Q8N5M1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATPAF2Q8N5M1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATPAF2Q8N5M1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATPAF2Q8N5M1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19■□□□□ 0.63
ATPAF2Q8N5M1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19■□□□□ 0.63
ATPAF2Q8N5M1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms