Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL023875.1-201ENST00000640777 796 ntBASIC17.3■□□□□ 0.36
DEPDC4Q8N2C3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DEPDC4Q8N2C3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
DEPDC4Q8N2C3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DEPDC4Q8N2C3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
DEPDC4Q8N2C3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.3■□□□□ 0.36
DEPDC4Q8N2C3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.3■□□□□ 0.36
DEPDC4Q8N2C3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DEPDC4Q8N2C3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 AC067852.2-201ENST00000590513 2313 ntBASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 AC110285.5-201ENST00000611501 352 ntBASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 AL121829.2-201ENST00000620908 328 ntBASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 AL121906.2-201ENST00000621597 723 ntBASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 AC011270.2-201ENST00000624293 2550 ntBASIC17.29■□□□□ 0.36
DEPDC4Q8N2C3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 AC099398.1-201ENST00000567919 2776 ntBASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 YBX1P10-201ENST00000444752 975 ntBASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 AP001412.1-201ENST00000608405 714 ntBASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DEPDC4Q8N2C3 AC008894.3-201ENST00000624324 3103 ntBASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 AC008764.6-201ENST00000595909 2069 ntBASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 KRASP1-201ENST00000407852 552 ntBASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 AC133681.1-201ENST00000465482 601 ntBASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.27■□□□□ 0.36
DEPDC4Q8N2C3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms