Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.99■□□□□ 0.63
SIX5Q8N196 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIX5Q8N196 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIX5Q8N196 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SIX5Q8N196 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.99■□□□□ 0.63
SIX5Q8N196 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX5Q8N196 RCC2P3-201ENST00000418112 1537 ntBASIC18.99■□□□□ 0.63
SIX5Q8N196 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX5Q8N196 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX5Q8N196 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX5Q8N196 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SIX5Q8N196 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SIX5Q8N196 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX5Q8N196 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SIX5Q8N196 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX5Q8N196 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIX5Q8N196 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX5Q8N196 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX5Q8N196 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX5Q8N196 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX5Q8N196 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX5Q8N196 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.98■□□□□ 0.63
SIX5Q8N196 AC243591.1-201ENST00000452967 1364 ntBASIC18.98■□□□□ 0.63
SIX5Q8N196 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIX5Q8N196 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX5Q8N196 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SIX5Q8N196 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.98■□□□□ 0.63
SIX5Q8N196 AC009065.1-201ENST00000564055 1225 ntBASIC18.98■□□□□ 0.63
SIX5Q8N196 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.98■□□□□ 0.63
SIX5Q8N196 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.98■□□□□ 0.63
SIX5Q8N196 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIX5Q8N196 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX5Q8N196 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.98■□□□□ 0.63
SIX5Q8N196 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX5Q8N196 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SIX5Q8N196 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.98■□□□□ 0.63
SIX5Q8N196 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX5Q8N196 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SIX5Q8N196 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX5Q8N196 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.98■□□□□ 0.63
SIX5Q8N196 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIX5Q8N196 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SIX5Q8N196 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SIX5Q8N196 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIX5Q8N196 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.97■□□□□ 0.63
SIX5Q8N196 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SIX5Q8N196 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.97■□□□□ 0.63
SIX5Q8N196 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.97■□□□□ 0.63
SIX5Q8N196 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.97■□□□□ 0.63
SIX5Q8N196 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.97■□□□□ 0.63
SIX5Q8N196 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.97■□□□□ 0.63
SIX5Q8N196 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.97■□□□□ 0.63
SIX5Q8N196 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.97■□□□□ 0.63
SIX5Q8N196 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.97■□□□□ 0.63
SIX5Q8N196 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SIX5Q8N196 AC073314.1-201ENST00000568729 2216 ntBASIC18.97■□□□□ 0.63
SIX5Q8N196 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIX5Q8N196 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.97■□□□□ 0.63
SIX5Q8N196 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIX5Q8N196 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
SIX5Q8N196 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIX5Q8N196 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIX5Q8N196 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIX5Q8N196 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIX5Q8N196 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.96■□□□□ 0.63
SIX5Q8N196 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIX5Q8N196 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIX5Q8N196 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIX5Q8N196 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.96■□□□□ 0.63
SIX5Q8N196 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.96■□□□□ 0.63
SIX5Q8N196 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.96■□□□□ 0.63
SIX5Q8N196 RPL13AP23-201ENST00000480739 586 ntBASIC18.96■□□□□ 0.63
SIX5Q8N196 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SIX5Q8N196 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SIX5Q8N196 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.96■□□□□ 0.63
SIX5Q8N196 AC011840.4-201ENST00000578471 627 ntBASIC18.96■□□□□ 0.63
SIX5Q8N196 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.96■□□□□ 0.63
SIX5Q8N196 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.96■□□□□ 0.63
SIX5Q8N196 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SIX5Q8N196 AL591684.3-201ENST00000605187 298 ntBASIC18.96■□□□□ 0.63
SIX5Q8N196 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
SIX5Q8N196 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.96■□□□□ 0.63
SIX5Q8N196 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIX5Q8N196 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.96■□□□□ 0.63
SIX5Q8N196 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIX5Q8N196 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIX5Q8N196 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIX5Q8N196 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SIX5Q8N196 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SIX5Q8N196 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SIX5Q8N196 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX5Q8N196 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX5Q8N196 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX5Q8N196 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX5Q8N196 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.95■□□□□ 0.62
SIX5Q8N196 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX5Q8N196 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.95■□□□□ 0.62
SIX5Q8N196 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.95■□□□□ 0.62
SIX5Q8N196 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.95■□□□□ 0.62
SIX5Q8N196 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms