Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 AC104076.2-201ENST00000448912 469 ntBASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 COX11P1-201ENST00000489116 835 ntBASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 AC140113.3-201ENST00000605663 199 ntBASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 AL023973.1-201ENST00000624619 620 ntBASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
SCUBE3Q8IX30 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.52■□□□□ 0.71
SCUBE3Q8IX30 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.52■□□□□ 0.71
SCUBE3Q8IX30 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SCUBE3Q8IX30 AC104581.1-202ENST00000635932 2618 ntBASIC19.52■□□□□ 0.71
SCUBE3Q8IX30 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SCUBE3Q8IX30 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SCUBE3Q8IX30 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 AC112777.1-201ENST00000540175 1423 ntBASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 KRT8P50-201ENST00000562022 1438 ntBASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 AC011558.1-201ENST00000623459 338 ntBASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 KRT8P7-201ENST00000533003 1432 ntBASIC19.51■□□□□ 0.71
SCUBE3Q8IX30 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 MYLKP1-201ENST00000509077 1580 ntBASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 AC117947.1-201ENST00000427448 529 ntBASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 YBX1P2-201ENST00000489612 999 ntBASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 GCSHP2-201ENST00000560971 527 ntBASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 AC006011.2-201ENST00000621313 1158 ntBASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCUBE3Q8IX30 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms