Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 AC034232.1-201ENST00000506026 1064 ntBASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 AC024243.1-201ENST00000609234 778 ntBASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 AC008556.1-201ENST00000610908 2040 ntBASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 KRT8P32-201ENST00000512863 1461 ntBASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
TRIM48Q8IWZ4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 AL671277.2-201ENST00000458060 996 ntBASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 AC112497.1-201ENST00000624824 639 ntBASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 AC005332.7-201ENST00000614046 2005 ntBASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 AC116562.4-201ENST00000641316 2276 ntBASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM48Q8IWZ4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms