Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 AL121894.2-201ENST00000602977 491 ntBASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 AL158211.5-201ENST00000623583 2518 ntBASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 AC006333.2-201ENST00000607957 2099 ntBASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 DRAXINP1-201ENST00000437611 948 ntBASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 NUS1P1-201ENST00000446295 882 ntBASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 PRELID1P1-202ENST00000567272 903 ntBASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 AP002414.4-201ENST00000589764 1148 ntBASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.98□□□□□ -0.01
C9orf139Q6ZV77 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C9orf139Q6ZV77 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms