Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 PCDHAC2-203ENST00000615316 3011 ntBASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 AC079776.4-201ENST00000511039 504 ntBASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 GPR32P1-201ENST00000601788 811 ntBASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 AC024563.2-201ENST00000603282 481 ntBASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 IGHV3-41-201ENST00000613121 348 ntBASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC149Q6ZUS6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 AC074051.2-201ENST00000565115 352 ntBASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 SLC25A6P4-201ENST00000586535 553 ntBASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC149Q6ZUS6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 Z69720.1-201ENST00000601483 472 ntBASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 AL121912.1-201ENST00000603683 238 ntBASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC149Q6ZUS6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 Z98044.1-201ENST00000632503 1764 ntBASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms