Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 WIZP1-201ENST00000531444 2299 ntBASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 CYP2D8P-201ENST00000433633 1490 ntBASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 AC008556.1-201ENST00000610908 2040 ntBASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 MIR1238-201ENST00000408483 83 ntBASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.69■□□□□ 0.26
NHLRC1Q6VVB1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 AP000997.3-201ENST00000623333 2250 ntBASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 TSPY14P-201ENST00000303979 915 ntBASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 MIR564-202ENST00000385049 94 ntBASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 KRT18P41-201ENST00000518924 1277 ntBASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NHLRC1Q6VVB1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 AL499627.1-201ENST00000569373 2188 ntBASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 INGX-201ENST00000359239 846 ntBASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 TSPY17P-201ENST00000450329 467 ntBASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 AC010947.1-201ENST00000623454 693 ntBASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms