Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 AC092329.2-201ENST00000598402 547 ntBASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DCLRE1AQ6PJP8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 CHCHD2P8-201ENST00000429873 447 ntBASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 AP002383.4-201ENST00000442518 975 ntBASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 AP003733.1-201ENST00000491725 852 ntBASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 MIR3180-1-201ENST00000580374 94 ntBASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 MIR3180-3-201ENST00000584616 94 ntBASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 AC012313.10-201ENST00000623509 926 ntBASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DCLRE1AQ6PJP8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 AC005332.3-201ENST00000589904 676 ntBASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 AC024563.2-201ENST00000603282 481 ntBASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 AL163051.1-201ENST00000569214 1512 ntBASIC19.79■□□□□ 0.76
DCLRE1AQ6PJP8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms