Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC27A1Q6PCB7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC27A1Q6PCB7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC27A1Q6PCB7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC27A1Q6PCB7 TSSC2-201ENST00000450217 709 ntBASIC20.08■□□□□ 0.81
SLC27A1Q6PCB7 KRT8P26-201ENST00000534154 1276 ntBASIC20.08■□□□□ 0.81
SLC27A1Q6PCB7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.08■□□□□ 0.81
SLC27A1Q6PCB7 RNF126P1-202ENST00000569893 925 ntBASIC20.08■□□□□ 0.81
SLC27A1Q6PCB7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.08■□□□□ 0.81
SLC27A1Q6PCB7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC27A1Q6PCB7 NPAP1P7-201ENST00000613027 823 ntBASIC20.08■□□□□ 0.81
SLC27A1Q6PCB7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC27A1Q6PCB7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SLC27A1Q6PCB7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC27A1Q6PCB7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.08■□□□□ 0.8
SLC27A1Q6PCB7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC27A1Q6PCB7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.08■□□□□ 0.8
SLC27A1Q6PCB7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SLC27A1Q6PCB7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 TSPY22P-201ENST00000427496 604 ntBASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 AC112777.1-201ENST00000540175 1423 ntBASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC27A1Q6PCB7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 KRT18P48-201ENST00000434763 852 ntBASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 AP003733.1-201ENST00000491725 852 ntBASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 AC024563.2-201ENST00000603282 481 ntBASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC27A1Q6PCB7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 MIR149-201ENST00000384879 89 ntBASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 AC092119.3-201ENST00000612618 583 ntBASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 Z83836.1-201ENST00000624605 1642 ntBASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC27A1Q6PCB7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC27A1Q6PCB7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC27A1Q6PCB7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC27A1Q6PCB7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC27A1Q6PCB7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC27A1Q6PCB7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms