Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 PRSS44-201ENST00000515154 1146 ntBASIC16.93■□□□□ 0.3
NIPAL3Q6P499 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 AL162741.1-201ENST00000565563 1558 ntBASIC16.93■□□□□ 0.3
NIPAL3Q6P499 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL3Q6P499 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 SLC25A1P4-201ENST00000567977 778 ntBASIC16.92■□□□□ 0.3
NIPAL3Q6P499 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 AP000692.2-201ENST00000608391 879 ntBASIC16.92■□□□□ 0.3
NIPAL3Q6P499 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 DGCR10-201ENST00000609839 495 ntBASIC16.92■□□□□ 0.3
NIPAL3Q6P499 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.92■□□□□ 0.3
NIPAL3Q6P499 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 HEIH-201ENST00000623091 1652 ntBASIC16.91■□□□□ 0.3
NIPAL3Q6P499 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms