Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 AL353719.1-201ENST00000566847 864 ntBASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 AC008556.1-201ENST00000610908 2040 ntBASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST2H2AA3Q6FI13 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 GPAT2P1-201ENST00000444924 1672 ntBASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 AC090164.3-201ENST00000610780 2143 ntBASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 MIR564-202ENST00000385049 94 ntBASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 AL390955.1-201ENST00000428694 934 ntBASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST2H2AA3Q6FI13 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
HIST2H2AA3Q6FI13 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.46
HIST2H2AA3Q6FI13 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 AC005082.1-201ENST00000413042 2259 ntBASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 AC093827.2-201ENST00000512654 315 ntBASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 BX088651.1-201ENST00000540551 451 ntBASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST2H2AA3Q6FI13 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 AC128688.1-201ENST00000487626 519 ntBASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 MIR3180-5-201ENST00000583743 153 ntBASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 AL023803.3-201ENST00000615559 522 ntBASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 KRT8P45-201ENST00000414328 1447 ntBASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HIST2H2AA3Q6FI13 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms