Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 AC099343.3-201ENST00000605834 2503 ntBASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 AC006333.2-201ENST00000607957 2099 ntBASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 AC068587.9-201ENST00000641814 219 ntBASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF17Q5VTA0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 AL645929.1-201ENST00000420084 975 ntBASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 KRT18P56-201ENST00000507275 550 ntBASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 MIR3917-201ENST00000580971 93 ntBASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF17Q5VTA0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PRAMEF17Q5VTA0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms