Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 AL163051.1-201ENST00000569214 1512 ntBASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDC42BPAQ5VT25 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC28.06■■■□□ 2.08
CDC42BPAQ5VT25 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC28.06■■■□□ 2.08
CDC42BPAQ5VT25 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
CDC42BPAQ5VT25 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
CDC42BPAQ5VT25 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDC42BPAQ5VT25 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDC42BPAQ5VT25 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
CDC42BPAQ5VT25 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDC42BPAQ5VT25 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CDC42BPAQ5VT25 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDC42BPAQ5VT25 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDC42BPAQ5VT25 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC28.06■■■□□ 2.08
CDC42BPAQ5VT25 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC28.06■■■□□ 2.08
CDC42BPAQ5VT25 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC28.06■■■□□ 2.08
CDC42BPAQ5VT25 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDC42BPAQ5VT25 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 RPL18-209ENST00000550645 463 ntTSL 5 BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 RPL18-214ENST00000552588 559 ntTSL 3 BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 GZMM-202ENST00000592501 941 ntTSL 3 BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 AL049840.3-201ENST00000602669 611 ntBASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPAQ5VT25 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 POM121L3P-201ENST00000419331 1163 ntBASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
CDC42BPAQ5VT25 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 MOK-208ENST00000519058 917 ntTSL 2 BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 AP001269.4-201ENST00000609611 512 ntBASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CDC42BPAQ5VT25 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC28.02■■■□□ 2.08
CDC42BPAQ5VT25 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDC42BPAQ5VT25 MEG3-211ENST00000452514 461 ntTSL 3 BASIC28.02■■■□□ 2.08
CDC42BPAQ5VT25 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC28.02■■■□□ 2.08
CDC42BPAQ5VT25 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC28.02■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms