Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.65■□□□□ 0.74
VARS2Q5ST30 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.65■□□□□ 0.74
VARS2Q5ST30 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VARS2Q5ST30 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.65■□□□□ 0.74
VARS2Q5ST30 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VARS2Q5ST30 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.65■□□□□ 0.74
VARS2Q5ST30 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VARS2Q5ST30 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.65■□□□□ 0.74
VARS2Q5ST30 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.65■□□□□ 0.74
VARS2Q5ST30 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.65■□□□□ 0.74
VARS2Q5ST30 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.65■□□□□ 0.74
VARS2Q5ST30 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.65■□□□□ 0.74
VARS2Q5ST30 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VARS2Q5ST30 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
VARS2Q5ST30 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
VARS2Q5ST30 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
VARS2Q5ST30 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VARS2Q5ST30 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.65■□□□□ 0.74
VARS2Q5ST30 KRT18P1-202ENST00000452408 1331 ntBASIC19.65■□□□□ 0.74
VARS2Q5ST30 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VARS2Q5ST30 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VARS2Q5ST30 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VARS2Q5ST30 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.64■□□□□ 0.74
VARS2Q5ST30 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VARS2Q5ST30 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
VARS2Q5ST30 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VARS2Q5ST30 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.64■□□□□ 0.74
VARS2Q5ST30 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARS2Q5ST30 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VARS2Q5ST30 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
VARS2Q5ST30 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.64■□□□□ 0.73
VARS2Q5ST30 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VARS2Q5ST30 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARS2Q5ST30 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARS2Q5ST30 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARS2Q5ST30 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VARS2Q5ST30 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VARS2Q5ST30 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.64■□□□□ 0.73
VARS2Q5ST30 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.64■□□□□ 0.73
VARS2Q5ST30 AL390719.2-201ENST00000606993 987 ntBASIC19.64■□□□□ 0.73
VARS2Q5ST30 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VARS2Q5ST30 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARS2Q5ST30 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.64■□□□□ 0.73
VARS2Q5ST30 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VARS2Q5ST30 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARS2Q5ST30 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VARS2Q5ST30 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.64■□□□□ 0.73
VARS2Q5ST30 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.64■□□□□ 0.73
VARS2Q5ST30 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.64■□□□□ 0.73
VARS2Q5ST30 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VARS2Q5ST30 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.64■□□□□ 0.73
VARS2Q5ST30 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARS2Q5ST30 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARS2Q5ST30 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARS2Q5ST30 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VARS2Q5ST30 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.63■□□□□ 0.73
VARS2Q5ST30 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
VARS2Q5ST30 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VARS2Q5ST30 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.63■□□□□ 0.73
VARS2Q5ST30 AP000593.1-201ENST00000393668 712 ntBASIC19.63■□□□□ 0.73
VARS2Q5ST30 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.63■□□□□ 0.73
VARS2Q5ST30 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC19.63■□□□□ 0.73
VARS2Q5ST30 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.63■□□□□ 0.73
VARS2Q5ST30 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.63■□□□□ 0.73
VARS2Q5ST30 AC024563.2-201ENST00000603282 481 ntBASIC19.63■□□□□ 0.73
VARS2Q5ST30 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
VARS2Q5ST30 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VARS2Q5ST30 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VARS2Q5ST30 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VARS2Q5ST30 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.62■□□□□ 0.73
VARS2Q5ST30 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VARS2Q5ST30 AL163051.1-201ENST00000569214 1512 ntBASIC19.62■□□□□ 0.73
VARS2Q5ST30 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
VARS2Q5ST30 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VARS2Q5ST30 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VARS2Q5ST30 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.62■□□□□ 0.73
VARS2Q5ST30 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.62■□□□□ 0.73
VARS2Q5ST30 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.62■□□□□ 0.73
VARS2Q5ST30 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.62■□□□□ 0.73
VARS2Q5ST30 PRELID1P1-202ENST00000567272 903 ntBASIC19.62■□□□□ 0.73
VARS2Q5ST30 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.62■□□□□ 0.73
VARS2Q5ST30 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VARS2Q5ST30 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARS2Q5ST30 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms