Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 NEFHP1-201ENST00000412845 2629 ntBASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 MIR3180-5-201ENST00000583743 153 ntBASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 AL353801.3-201ENST00000609898 542 ntBASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 AC120114.3-201ENST00000611923 658 ntBASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTC1Q2NKJ3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 AC093503.3-201ENST00000624917 2352 ntBASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 AC104819.1-201ENST00000504587 486 ntBASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CTC1Q2NKJ3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTC1Q2NKJ3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.83■□□□□ 0.77
CTC1Q2NKJ3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTC1Q2NKJ3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTC1Q2NKJ3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTC1Q2NKJ3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.83■□□□□ 0.77
CTC1Q2NKJ3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTC1Q2NKJ3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.83■□□□□ 0.77
CTC1Q2NKJ3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.83■□□□□ 0.77
CTC1Q2NKJ3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTC1Q2NKJ3 TSPY12P-201ENST00000421279 868 ntBASIC19.83■□□□□ 0.77
CTC1Q2NKJ3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.83■□□□□ 0.77
CTC1Q2NKJ3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTC1Q2NKJ3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.83■□□□□ 0.77
CTC1Q2NKJ3 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.83■□□□□ 0.77
CTC1Q2NKJ3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTC1Q2NKJ3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTC1Q2NKJ3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTC1Q2NKJ3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTC1Q2NKJ3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CTC1Q2NKJ3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.83■□□□□ 0.76
CTC1Q2NKJ3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTC1Q2NKJ3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CTC1Q2NKJ3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.83■□□□□ 0.76
CTC1Q2NKJ3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
CTC1Q2NKJ3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTC1Q2NKJ3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CTC1Q2NKJ3 AC104417.2-201ENST00000562989 1793 ntBASIC19.83■□□□□ 0.76
CTC1Q2NKJ3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 AL590627.1-203ENST00000421194 1026 ntBASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 PMS2P1-201ENST00000431037 1228 ntBASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 AC090616.6-201ENST00000582640 721 ntBASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 AC112497.1-201ENST00000624824 639 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms