Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH17Q12864 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH17Q12864 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH17Q12864 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH17Q12864 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH17Q12864 AP000593.1-201ENST00000393668 712 ntBASIC18.78■□□□□ 0.6
CDH17Q12864 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.78■□□□□ 0.6
CDH17Q12864 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH17Q12864 SNORA78-201ENST00000459373 127 ntBASIC18.78■□□□□ 0.6
CDH17Q12864 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH17Q12864 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CDH17Q12864 FITM1-202ENST00000559294 800 ntBASIC18.78■□□□□ 0.6
CDH17Q12864 MIR3180-5-201ENST00000583743 153 ntBASIC18.78■□□□□ 0.6
CDH17Q12864 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CDH17Q12864 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH17Q12864 AP000525.1-201ENST00000608286 694 ntBASIC18.78■□□□□ 0.6
CDH17Q12864 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH17Q12864 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH17Q12864 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH17Q12864 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CDH17Q12864 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH17Q12864 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH17Q12864 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CDH17Q12864 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH17Q12864 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH17Q12864 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH17Q12864 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH17Q12864 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH17Q12864 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CDH17Q12864 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH17Q12864 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.78■□□□□ 0.6
CDH17Q12864 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH17Q12864 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.77■□□□□ 0.6
CDH17Q12864 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CDH17Q12864 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH17Q12864 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH17Q12864 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CDH17Q12864 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH17Q12864 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH17Q12864 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH17Q12864 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH17Q12864 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH17Q12864 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH17Q12864 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH17Q12864 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CDH17Q12864 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH17Q12864 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.77■□□□□ 0.6
CDH17Q12864 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH17Q12864 TSPY17P-201ENST00000450329 467 ntBASIC18.77■□□□□ 0.6
CDH17Q12864 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH17Q12864 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH17Q12864 MIR4674-201ENST00000582457 87 ntBASIC18.77■□□□□ 0.6
CDH17Q12864 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CDH17Q12864 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH17Q12864 AL023803.3-201ENST00000615559 522 ntBASIC18.77■□□□□ 0.6
CDH17Q12864 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.77■□□□□ 0.6
CDH17Q12864 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH17Q12864 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.77■□□□□ 0.6
CDH17Q12864 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH17Q12864 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CDH17Q12864 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH17Q12864 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.77■□□□□ 0.6
CDH17Q12864 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
CDH17Q12864 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.77■□□□□ 0.59
CDH17Q12864 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CDH17Q12864 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH17Q12864 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH17Q12864 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH17Q12864 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CDH17Q12864 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CDH17Q12864 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.77■□□□□ 0.59
CDH17Q12864 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH17Q12864 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH17Q12864 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH17Q12864 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH17Q12864 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH17Q12864 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH17Q12864 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH17Q12864 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH17Q12864 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH17Q12864 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH17Q12864 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH17Q12864 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH17Q12864 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH17Q12864 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH17Q12864 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.76■□□□□ 0.59
CDH17Q12864 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CDH17Q12864 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH17Q12864 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH17Q12864 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH17Q12864 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH17Q12864 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH17Q12864 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH17Q12864 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH17Q12864 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDH17Q12864 AC007613.1-201ENST00000572811 2597 ntBASIC18.76■□□□□ 0.59
CDH17Q12864 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH17Q12864 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms