Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
PUDPQ08623 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.95■□□□□ 0.3
PUDPQ08623 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.95■□□□□ 0.3
PUDPQ08623 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.95■□□□□ 0.3
PUDPQ08623 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.95■□□□□ 0.3
PUDPQ08623 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.95■□□□□ 0.3
PUDPQ08623 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.95■□□□□ 0.3
PUDPQ08623 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.95■□□□□ 0.3
PUDPQ08623 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PUDPQ08623 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
PUDPQ08623 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
PUDPQ08623 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PUDPQ08623 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.95■□□□□ 0.3
PUDPQ08623 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PUDPQ08623 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PUDPQ08623 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.94■□□□□ 0.3
PUDPQ08623 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PUDPQ08623 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PUDPQ08623 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.94■□□□□ 0.3
PUDPQ08623 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PUDPQ08623 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
PUDPQ08623 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PUDPQ08623 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PUDPQ08623 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PUDPQ08623 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PUDPQ08623 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PUDPQ08623 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PUDPQ08623 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PUDPQ08623 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PUDPQ08623 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.94■□□□□ 0.3
PUDPQ08623 MIR718-201ENST00000390190 70 ntBASIC16.94■□□□□ 0.3
PUDPQ08623 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.94■□□□□ 0.3
PUDPQ08623 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PUDPQ08623 AC116562.2-201ENST00000507042 360 ntBASIC16.94■□□□□ 0.3
PUDPQ08623 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.94■□□□□ 0.3
PUDPQ08623 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.94■□□□□ 0.3
PUDPQ08623 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.94■□□□□ 0.3
PUDPQ08623 AP000692.2-201ENST00000608391 879 ntBASIC16.94■□□□□ 0.3
PUDPQ08623 DGCR10-201ENST00000609839 495 ntBASIC16.94■□□□□ 0.3
PUDPQ08623 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.94■□□□□ 0.3
PUDPQ08623 AL512353.2-201ENST00000448759 1962 ntBASIC16.94■□□□□ 0.3
PUDPQ08623 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
PUDPQ08623 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.94■□□□□ 0.3
PUDPQ08623 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PUDPQ08623 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PUDPQ08623 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PUDPQ08623 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.94■□□□□ 0.3
PUDPQ08623 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PUDPQ08623 NFIC-211ENST00000641145 8399 ntBASIC16.94■□□□□ 0.3
PUDPQ08623 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PUDPQ08623 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PUDPQ08623 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PUDPQ08623 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PUDPQ08623 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.94■□□□□ 0.3
PUDPQ08623 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 AC079598.2-202ENST00000546624 1451 ntBASIC16.93■□□□□ 0.3
PUDPQ08623 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PUDPQ08623 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PUDPQ08623 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
PUDPQ08623 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.93■□□□□ 0.3
PUDPQ08623 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.93■□□□□ 0.3
PUDPQ08623 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.93■□□□□ 0.3
PUDPQ08623 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PUDPQ08623 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PUDPQ08623 AL355355.2-201ENST00000442321 338 ntBASIC16.93■□□□□ 0.3
PUDPQ08623 AC008550.1-201ENST00000511500 884 ntBASIC16.93■□□□□ 0.3
PUDPQ08623 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PUDPQ08623 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.93■□□□□ 0.3
PUDPQ08623 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.93■□□□□ 0.3
PUDPQ08623 Z99916.2-201ENST00000604037 246 ntBASIC16.93■□□□□ 0.3
PUDPQ08623 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.93■□□□□ 0.3
PUDPQ08623 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PUDPQ08623 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.93■□□□□ 0.3
PUDPQ08623 KRT8P3-201ENST00000519669 1449 ntBASIC16.93■□□□□ 0.3
PUDPQ08623 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PUDPQ08623 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.93■□□□□ 0.3
PUDPQ08623 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PUDPQ08623 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PUDPQ08623 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.93■□□□□ 0.3
PUDPQ08623 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.92■□□□□ 0.3
PUDPQ08623 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PUDPQ08623 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PUDPQ08623 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PUDPQ08623 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms