Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBE3AQ05086 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.64■□□□□ 0.74
UBE3AQ05086 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
UBE3AQ05086 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.64■□□□□ 0.74
UBE3AQ05086 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBE3AQ05086 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
UBE3AQ05086 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBE3AQ05086 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
UBE3AQ05086 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBE3AQ05086 RNF165-205ENST00000588679 2904 ntBASIC19.64■□□□□ 0.73
UBE3AQ05086 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBE3AQ05086 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.64■□□□□ 0.73
UBE3AQ05086 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.64■□□□□ 0.73
UBE3AQ05086 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
UBE3AQ05086 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.64■□□□□ 0.73
UBE3AQ05086 AL773604.1-201ENST00000617417 272 ntBASIC19.64■□□□□ 0.73
UBE3AQ05086 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.64■□□□□ 0.73
UBE3AQ05086 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
UBE3AQ05086 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBE3AQ05086 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBE3AQ05086 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBE3AQ05086 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBE3AQ05086 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBE3AQ05086 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
UBE3AQ05086 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBE3AQ05086 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBE3AQ05086 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBE3AQ05086 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
UBE3AQ05086 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.64■□□□□ 0.73
UBE3AQ05086 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
UBE3AQ05086 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UBE3AQ05086 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
UBE3AQ05086 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.63■□□□□ 0.73
UBE3AQ05086 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE3AQ05086 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.63■□□□□ 0.73
UBE3AQ05086 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE3AQ05086 TREX1-205ENST00000625293 1783 ntBASIC19.63■□□□□ 0.73
UBE3AQ05086 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBE3AQ05086 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.63■□□□□ 0.73
UBE3AQ05086 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.63■□□□□ 0.73
UBE3AQ05086 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.63■□□□□ 0.73
UBE3AQ05086 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
UBE3AQ05086 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UBE3AQ05086 AC068587.9-201ENST00000641814 219 ntBASIC19.63■□□□□ 0.73
UBE3AQ05086 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE3AQ05086 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
UBE3AQ05086 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
UBE3AQ05086 IRX1P1-201ENST00000438849 1838 ntBASIC19.62■□□□□ 0.73
UBE3AQ05086 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBE3AQ05086 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBE3AQ05086 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
UBE3AQ05086 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBE3AQ05086 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBE3AQ05086 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.62■□□□□ 0.73
UBE3AQ05086 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBE3AQ05086 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
UBE3AQ05086 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
UBE3AQ05086 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
UBE3AQ05086 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBE3AQ05086 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.62■□□□□ 0.73
UBE3AQ05086 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.62■□□□□ 0.73
UBE3AQ05086 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.62■□□□□ 0.73
UBE3AQ05086 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBE3AQ05086 RNA5SP419-201ENST00000515908 135 ntBASIC19.62■□□□□ 0.73
UBE3AQ05086 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.62■□□□□ 0.73
UBE3AQ05086 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBE3AQ05086 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.62■□□□□ 0.73
UBE3AQ05086 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.62■□□□□ 0.73
UBE3AQ05086 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBE3AQ05086 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.62■□□□□ 0.73
UBE3AQ05086 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
UBE3AQ05086 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBE3AQ05086 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.62■□□□□ 0.73
UBE3AQ05086 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
UBE3AQ05086 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBE3AQ05086 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBE3AQ05086 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBE3AQ05086 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBE3AQ05086 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.61■□□□□ 0.73
UBE3AQ05086 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.61■□□□□ 0.73
UBE3AQ05086 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3AQ05086 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3AQ05086 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3AQ05086 FP475955.4-201ENST00000623131 1990 ntBASIC19.61■□□□□ 0.73
UBE3AQ05086 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.61■□□□□ 0.73
UBE3AQ05086 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3AQ05086 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3AQ05086 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
UBE3AQ05086 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3AQ05086 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.61■□□□□ 0.73
UBE3AQ05086 AC091607.1-201ENST00000490318 1060 ntBASIC19.61■□□□□ 0.73
UBE3AQ05086 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3AQ05086 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.61■□□□□ 0.73
UBE3AQ05086 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.61■□□□□ 0.73
UBE3AQ05086 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
UBE3AQ05086 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.61■□□□□ 0.73
UBE3AQ05086 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.61■□□□□ 0.73
UBE3AQ05086 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.61■□□□□ 0.73
UBE3AQ05086 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.61■□□□□ 0.73
UBE3AQ05086 TP73-AS1-207ENST00000624167 988 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms