Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H1AQ02539 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H1AQ02539 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H1AQ02539 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H1AQ02539 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 AC099398.1-201ENST00000567919 2776 ntBASIC14.23□□□□□ -0.13
HIST1H1AQ02539 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 NFIC-211ENST00000641145 8399 ntBASIC14.23□□□□□ -0.13
HIST1H1AQ02539 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1AQ02539 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 FER1L4-210ENST00000615531 5998 ntBASIC14.22□□□□□ -0.13
HIST1H1AQ02539 AC068880.1-201ENST00000507289 2297 ntBASIC14.22□□□□□ -0.13
HIST1H1AQ02539 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.22□□□□□ -0.13
HIST1H1AQ02539 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H1AQ02539 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms