Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.64■□□□□ 0.41
RAE1P78406 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAE1P78406 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RAE1P78406 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAE1P78406 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAE1P78406 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.64■□□□□ 0.41
RAE1P78406 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAE1P78406 AP000593.1-201ENST00000393668 712 ntBASIC17.64■□□□□ 0.41
RAE1P78406 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAE1P78406 TSPY17P-201ENST00000450329 467 ntBASIC17.64■□□□□ 0.41
RAE1P78406 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.64■□□□□ 0.41
RAE1P78406 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAE1P78406 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.64■□□□□ 0.41
RAE1P78406 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAE1P78406 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAE1P78406 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAE1P78406 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.64■□□□□ 0.41
RAE1P78406 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAE1P78406 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.64■□□□□ 0.41
RAE1P78406 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RAE1P78406 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAE1P78406 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
RAE1P78406 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.64■□□□□ 0.41
RAE1P78406 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RAE1P78406 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAE1P78406 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAE1P78406 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAE1P78406 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
RAE1P78406 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAE1P78406 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RAE1P78406 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAE1P78406 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAE1P78406 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAE1P78406 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.63■□□□□ 0.41
RAE1P78406 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RAE1P78406 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.63■□□□□ 0.41
RAE1P78406 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.63■□□□□ 0.41
RAE1P78406 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.63■□□□□ 0.41
RAE1P78406 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.63■□□□□ 0.41
RAE1P78406 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.63■□□□□ 0.41
RAE1P78406 CR769767.2-201ENST00000622735 460 ntBASIC17.63■□□□□ 0.41
RAE1P78406 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAE1P78406 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAE1P78406 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAE1P78406 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.63■□□□□ 0.41
RAE1P78406 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAE1P78406 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.63■□□□□ 0.41
RAE1P78406 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.63■□□□□ 0.41
RAE1P78406 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RAE1P78406 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAE1P78406 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAE1P78406 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
RAE1P78406 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RAE1P78406 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.62■□□□□ 0.41
RAE1P78406 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.62■□□□□ 0.41
RAE1P78406 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAE1P78406 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.62■□□□□ 0.41
RAE1P78406 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAE1P78406 INGX-201ENST00000359239 846 ntBASIC17.62■□□□□ 0.41
RAE1P78406 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.62■□□□□ 0.41
RAE1P78406 AC007663.1-201ENST00000438948 1240 ntBASIC17.62■□□□□ 0.41
RAE1P78406 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.62■□□□□ 0.41
RAE1P78406 MIR4497-201ENST00000583208 89 ntBASIC17.62■□□□□ 0.41
RAE1P78406 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.62■□□□□ 0.41
RAE1P78406 KRT17P2-201ENST00000300992 1314 ntBASIC17.62■□□□□ 0.41
RAE1P78406 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAE1P78406 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAE1P78406 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAE1P78406 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAE1P78406 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
RAE1P78406 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RAE1P78406 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.62■□□□□ 0.41
RAE1P78406 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAE1P78406 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAE1P78406 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.62■□□□□ 0.41
RAE1P78406 AL133373.2-201ENST00000623187 2828 ntBASIC17.62■□□□□ 0.41
RAE1P78406 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAE1P78406 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAE1P78406 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAE1P78406 AC099343.3-201ENST00000605834 2503 ntBASIC17.61■□□□□ 0.41
RAE1P78406 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
RAE1P78406 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAE1P78406 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.61■□□□□ 0.41
RAE1P78406 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAE1P78406 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.61■□□□□ 0.41
RAE1P78406 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAE1P78406 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.61■□□□□ 0.41
RAE1P78406 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.61■□□□□ 0.41
RAE1P78406 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAE1P78406 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.61■□□□□ 0.41
RAE1P78406 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAE1P78406 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RAE1P78406 KRT8P9-201ENST00000558927 1449 ntBASIC17.61■□□□□ 0.41
RAE1P78406 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAE1P78406 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.61■□□□□ 0.41
RAE1P78406 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAE1P78406 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAE1P78406 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAE1P78406 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.61■□□□□ 0.41
RAE1P78406 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms