Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.75■□□□□ 0.59
PRAMEP78395 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PRAMEP78395 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.75■□□□□ 0.59
PRAMEP78395 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.75■□□□□ 0.59
PRAMEP78395 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.75■□□□□ 0.59
PRAMEP78395 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.75■□□□□ 0.59
PRAMEP78395 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.75■□□□□ 0.59
PRAMEP78395 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.75■□□□□ 0.59
PRAMEP78395 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
PRAMEP78395 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PRAMEP78395 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
PRAMEP78395 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.75■□□□□ 0.59
PRAMEP78395 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PRAMEP78395 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.75■□□□□ 0.59
PRAMEP78395 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.75■□□□□ 0.59
PRAMEP78395 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
PRAMEP78395 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEP78395 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.74■□□□□ 0.59
PRAMEP78395 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEP78395 AL357033.4-201ENST00000617703 1807 ntBASIC18.74■□□□□ 0.59
PRAMEP78395 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEP78395 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEP78395 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEP78395 AC009113.1-201ENST00000570267 2443 ntBASIC18.74■□□□□ 0.59
PRAMEP78395 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEP78395 AC005332.8-201ENST00000622750 2735 ntBASIC18.74■□□□□ 0.59
PRAMEP78395 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PRAMEP78395 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEP78395 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEP78395 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEP78395 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEP78395 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PRAMEP78395 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEP78395 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PRAMEP78395 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.74■□□□□ 0.59
PRAMEP78395 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEP78395 SNORA78-201ENST00000459373 127 ntBASIC18.74■□□□□ 0.59
PRAMEP78395 CA15P1-201ENST00000481698 905 ntBASIC18.74■□□□□ 0.59
PRAMEP78395 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEP78395 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.74■□□□□ 0.59
PRAMEP78395 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.74■□□□□ 0.59
PRAMEP78395 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEP78395 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEP78395 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEP78395 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.74■□□□□ 0.59
PRAMEP78395 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEP78395 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEP78395 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
PRAMEP78395 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEP78395 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEP78395 KRT17P2-201ENST00000300992 1314 ntBASIC18.74■□□□□ 0.59
PRAMEP78395 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEP78395 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEP78395 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PRAMEP78395 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PRAMEP78395 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PRAMEP78395 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.73■□□□□ 0.59
PRAMEP78395 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.73■□□□□ 0.59
PRAMEP78395 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PRAMEP78395 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.73■□□□□ 0.59
PRAMEP78395 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 RBM17P1-201ENST00000453646 1190 ntBASIC18.73■□□□□ 0.59
PRAMEP78395 AP005242.2-201ENST00000580065 1175 ntBASIC18.73■□□□□ 0.59
PRAMEP78395 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PRAMEP78395 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
PRAMEP78395 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.73■□□□□ 0.59
PRAMEP78395 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEP78395 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PRAMEP78395 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms