Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.24■□□□□ 0.19
HIST1H3AP68431 AC007663.1-201ENST00000438948 1240 ntBASIC16.24■□□□□ 0.19
HIST1H3AP68431 TSPY15P-201ENST00000457163 923 ntBASIC16.24■□□□□ 0.19
HIST1H3AP68431 BX088651.1-201ENST00000540551 451 ntBASIC16.24■□□□□ 0.19
HIST1H3AP68431 C2orf69P3-201ENST00000565542 1120 ntBASIC16.24■□□□□ 0.19
HIST1H3AP68431 AC116562.4-202ENST00000641738 218 ntBASIC16.24■□□□□ 0.19
HIST1H3AP68431 KRT8P50-201ENST00000562022 1438 ntBASIC16.24■□□□□ 0.19
HIST1H3AP68431 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
HIST1H3AP68431 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.24■□□□□ 0.19
HIST1H3AP68431 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H3AP68431 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.24■□□□□ 0.19
HIST1H3AP68431 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.23■□□□□ 0.19
HIST1H3AP68431 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H3AP68431 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H3AP68431 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.23■□□□□ 0.19
HIST1H3AP68431 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H3AP68431 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H3AP68431 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H3AP68431 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HIST1H3AP68431 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H3AP68431 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.23■□□□□ 0.19
HIST1H3AP68431 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HIST1H3AP68431 AC036111.1-201ENST00000533973 1582 ntBASIC16.23■□□□□ 0.19
HIST1H3AP68431 HOXB1-202ENST00000577092 1414 ntBASIC16.23■□□□□ 0.19
HIST1H3AP68431 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H3AP68431 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST1H3AP68431 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H3AP68431 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H3AP68431 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
HIST1H3AP68431 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H3AP68431 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H3AP68431 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.23■□□□□ 0.19
HIST1H3AP68431 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H3AP68431 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.23■□□□□ 0.19
HIST1H3AP68431 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST1H3AP68431 EGLN1P1-201ENST00000531623 762 ntBASIC16.23■□□□□ 0.19
HIST1H3AP68431 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H3AP68431 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.23■□□□□ 0.19
HIST1H3AP68431 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST1H3AP68431 CR769767.2-201ENST00000622735 460 ntBASIC16.23■□□□□ 0.19
HIST1H3AP68431 AC010653.2-201ENST00000623505 997 ntBASIC16.23■□□□□ 0.19
HIST1H3AP68431 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H3AP68431 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
HIST1H3AP68431 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H3AP68431 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H3AP68431 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H3AP68431 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HIST1H3AP68431 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H3AP68431 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H3AP68431 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H3AP68431 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H3AP68431 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HIST1H3AP68431 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H3AP68431 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.22■□□□□ 0.19
HIST1H3AP68431 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.22■□□□□ 0.19
HIST1H3AP68431 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.22■□□□□ 0.19
HIST1H3AP68431 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.22■□□□□ 0.19
HIST1H3AP68431 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H3AP68431 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H3AP68431 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H3AP68431 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.22■□□□□ 0.19
HIST1H3AP68431 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HIST1H3AP68431 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.22■□□□□ 0.19
HIST1H3AP68431 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H3AP68431 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H3AP68431 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H3AP68431 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H3AP68431 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HIST1H3AP68431 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST1H3AP68431 KRT8P7-201ENST00000533003 1432 ntBASIC16.21■□□□□ 0.19
HIST1H3AP68431 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H3AP68431 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H3AP68431 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HIST1H3AP68431 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST1H3AP68431 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST1H3AP68431 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H3AP68431 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.21■□□□□ 0.19
HIST1H3AP68431 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST1H3AP68431 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.21■□□□□ 0.19
HIST1H3AP68431 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H3AP68431 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H3AP68431 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H3AP68431 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.21■□□□□ 0.19
HIST1H3AP68431 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.21■□□□□ 0.19
HIST1H3AP68431 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
HIST1H3AP68431 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HIST1H3AP68431 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST1H3AP68431 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H3AP68431 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.21■□□□□ 0.18
HIST1H3AP68431 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.21■□□□□ 0.18
HIST1H3AP68431 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HIST1H3AP68431 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms