Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB38P57729 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB38P57729 MIR3180-4-201ENST00000582223 153 ntBASIC17.46■□□□□ 0.39
RAB38P57729 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB38P57729 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB38P57729 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB38P57729 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RAB38P57729 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB38P57729 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB38P57729 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RAB38P57729 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
RAB38P57729 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RAB38P57729 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB38P57729 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB38P57729 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.45■□□□□ 0.38
RAB38P57729 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB38P57729 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB38P57729 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RAB38P57729 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB38P57729 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.45■□□□□ 0.38
RAB38P57729 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RAB38P57729 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB38P57729 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RAB38P57729 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
RAB38P57729 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RAB38P57729 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB38P57729 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB38P57729 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB38P57729 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB38P57729 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RAB38P57729 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB38P57729 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
RAB38P57729 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
RAB38P57729 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
RAB38P57729 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RAB38P57729 TSPY5P-201ENST00000426936 936 ntBASIC17.44■□□□□ 0.38
RAB38P57729 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RAB38P57729 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB38P57729 AC034232.1-201ENST00000506026 1064 ntBASIC17.44■□□□□ 0.38
RAB38P57729 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB38P57729 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 MIR3917-201ENST00000580971 93 ntBASIC17.44■□□□□ 0.38
RAB38P57729 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.44■□□□□ 0.38
RAB38P57729 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RAB38P57729 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RAB38P57729 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB38P57729 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RAB38P57729 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB38P57729 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB38P57729 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 AL163051.1-201ENST00000569214 1512 ntBASIC17.43■□□□□ 0.38
RAB38P57729 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB38P57729 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RAB38P57729 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 DUX4L26-201ENST00000489078 1255 ntBASIC17.43■□□□□ 0.38
RAB38P57729 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB38P57729 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB38P57729 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms