Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NUBP1P53384 UNC93B6-202ENST00000528242 690 ntBASIC18.48■□□□□ 0.55
NUBP1P53384 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.48■□□□□ 0.55
NUBP1P53384 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.48■□□□□ 0.55
NUBP1P53384 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.48■□□□□ 0.55
NUBP1P53384 AC090950.1-202ENST00000605733 644 ntBASIC18.48■□□□□ 0.55
NUBP1P53384 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NUBP1P53384 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUBP1P53384 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUBP1P53384 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUBP1P53384 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NUBP1P53384 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NUBP1P53384 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC18.47■□□□□ 0.55
NUBP1P53384 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.47■□□□□ 0.55
NUBP1P53384 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.47■□□□□ 0.55
NUBP1P53384 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.47■□□□□ 0.55
NUBP1P53384 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.47■□□□□ 0.55
NUBP1P53384 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC18.47■□□□□ 0.55
NUBP1P53384 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.47■□□□□ 0.55
NUBP1P53384 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.47■□□□□ 0.55
NUBP1P53384 AP002472.1-201ENST00000577490 586 ntBASIC18.47■□□□□ 0.55
NUBP1P53384 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NUBP1P53384 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NUBP1P53384 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NUBP1P53384 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NUBP1P53384 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NUBP1P53384 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUBP1P53384 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.46■□□□□ 0.55
NUBP1P53384 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.46■□□□□ 0.55
NUBP1P53384 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUBP1P53384 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUBP1P53384 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUBP1P53384 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.46■□□□□ 0.55
NUBP1P53384 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUBP1P53384 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUBP1P53384 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.55
NUBP1P53384 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUBP1P53384 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.46■□□□□ 0.55
NUBP1P53384 SDR42E1P3-201ENST00000438345 502 ntBASIC18.46■□□□□ 0.55
NUBP1P53384 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.46■□□□□ 0.55
NUBP1P53384 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.46■□□□□ 0.55
NUBP1P53384 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.46■□□□□ 0.55
NUBP1P53384 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.46■□□□□ 0.55
NUBP1P53384 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.46■□□□□ 0.55
NUBP1P53384 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.46■□□□□ 0.55
NUBP1P53384 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUBP1P53384 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC18.46■□□□□ 0.55
NUBP1P53384 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC18.46■□□□□ 0.55
NUBP1P53384 AC021321.1-201ENST00000607397 1113 ntBASIC18.46■□□□□ 0.55
NUBP1P53384 AL139288.1-201ENST00000623748 933 ntBASIC18.46■□□□□ 0.55
NUBP1P53384 AL356309.3-201ENST00000624132 1934 ntBASIC18.46■□□□□ 0.55
NUBP1P53384 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NUBP1P53384 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUBP1P53384 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.46■□□□□ 0.55
NUBP1P53384 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NUBP1P53384 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUBP1P53384 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
NUBP1P53384 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUBP1P53384 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUBP1P53384 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUBP1P53384 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NUBP1P53384 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUBP1P53384 RCC2P3-201ENST00000418112 1537 ntBASIC18.45■□□□□ 0.54
NUBP1P53384 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NUBP1P53384 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUBP1P53384 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUBP1P53384 FEM1AP4-201ENST00000443167 1987 ntBASIC18.45■□□□□ 0.54
NUBP1P53384 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUBP1P53384 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUBP1P53384 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUBP1P53384 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUBP1P53384 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUBP1P53384 ABCD1P5-201ENST00000445663 754 ntBASIC18.45■□□□□ 0.54
NUBP1P53384 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.45■□□□□ 0.54
NUBP1P53384 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUBP1P53384 SPCS2P1-201ENST00000561636 679 ntBASIC18.45■□□□□ 0.54
NUBP1P53384 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.45■□□□□ 0.54
NUBP1P53384 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.45■□□□□ 0.54
NUBP1P53384 AC008687.5-201ENST00000593746 558 ntBASIC18.45■□□□□ 0.54
NUBP1P53384 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC18.45■□□□□ 0.54
NUBP1P53384 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NUBP1P53384 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NUBP1P53384 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.45■□□□□ 0.54
NUBP1P53384 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.45■□□□□ 0.54
NUBP1P53384 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUBP1P53384 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.45■□□□□ 0.54
NUBP1P53384 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUBP1P53384 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.45■□□□□ 0.54
NUBP1P53384 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUBP1P53384 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.45■□□□□ 0.54
NUBP1P53384 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.45■□□□□ 0.54
NUBP1P53384 INTS4P1-201ENST00000438455 1935 ntBASIC18.45■□□□□ 0.54
NUBP1P53384 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
NUBP1P53384 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUBP1P53384 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.44■□□□□ 0.54
NUBP1P53384 C9orf163-202ENST00000624034 2573 ntBASIC18.44■□□□□ 0.54
NUBP1P53384 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUBP1P53384 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUBP1P53384 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.44■□□□□ 0.54
NUBP1P53384 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms