Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP11P51784 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
USP11P51784 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP11P51784 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.98■□□□□ 0.95
USP11P51784 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP11P51784 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP11P51784 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.98■□□□□ 0.95
USP11P51784 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP11P51784 NTF6B-201ENST00000591913 560 ntBASIC20.98■□□□□ 0.95
USP11P51784 HYMAI.1-201ENST00000620949 238 ntBASIC20.98■□□□□ 0.95
USP11P51784 AL138781.2-201ENST00000617896 1843 ntBASIC20.98■□□□□ 0.95
USP11P51784 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.98■□□□□ 0.95
USP11P51784 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP11P51784 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP11P51784 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.98■□□□□ 0.95
USP11P51784 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.98■□□□□ 0.95
USP11P51784 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP11P51784 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
USP11P51784 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP11P51784 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP11P51784 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP11P51784 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
USP11P51784 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP11P51784 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
USP11P51784 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP11P51784 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP11P51784 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
USP11P51784 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP11P51784 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.97■□□□□ 0.95
USP11P51784 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP11P51784 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
USP11P51784 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
USP11P51784 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.97■□□□□ 0.95
USP11P51784 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.97■□□□□ 0.95
USP11P51784 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP11P51784 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP11P51784 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.97■□□□□ 0.95
USP11P51784 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.97■□□□□ 0.95
USP11P51784 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP11P51784 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
USP11P51784 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP11P51784 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP11P51784 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
USP11P51784 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP11P51784 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP11P51784 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP11P51784 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
USP11P51784 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.96■□□□□ 0.95
USP11P51784 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP11P51784 MIR149-201ENST00000384879 89 ntBASIC20.96■□□□□ 0.95
USP11P51784 PVRIG2P-201ENST00000435460 978 ntBASIC20.96■□□□□ 0.95
USP11P51784 AC112907.2-201ENST00000448639 330 ntBASIC20.96■□□□□ 0.95
USP11P51784 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
USP11P51784 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP11P51784 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP11P51784 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP11P51784 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
USP11P51784 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.96■□□□□ 0.95
USP11P51784 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP11P51784 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP11P51784 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP11P51784 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP11P51784 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.95■□□□□ 0.94
USP11P51784 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP11P51784 AC004408.2-201ENST00000623613 2777 ntBASIC20.95■□□□□ 0.94
USP11P51784 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP11P51784 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.95■□□□□ 0.94
USP11P51784 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP11P51784 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP11P51784 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.95■□□□□ 0.94
USP11P51784 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.95■□□□□ 0.94
USP11P51784 AC079602.3-201ENST00000623931 403 ntBASIC20.95■□□□□ 0.94
USP11P51784 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.95■□□□□ 0.94
USP11P51784 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
USP11P51784 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP11P51784 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
USP11P51784 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.95■□□□□ 0.94
USP11P51784 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP11P51784 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.95■□□□□ 0.94
USP11P51784 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP11P51784 AC120498.9-201ENST00000339021 3867 ntBASIC20.94■□□□□ 0.94
USP11P51784 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP11P51784 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
USP11P51784 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.94■□□□□ 0.94
USP11P51784 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP11P51784 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP11P51784 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP11P51784 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP11P51784 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP11P51784 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.94■□□□□ 0.94
USP11P51784 AL031133.1-201ENST00000406807 723 ntBASIC20.94■□□□□ 0.94
USP11P51784 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.94■□□□□ 0.94
USP11P51784 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.94■□□□□ 0.94
USP11P51784 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.94■□□□□ 0.94
USP11P51784 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP11P51784 KRT18P35-201ENST00000510488 1269 ntBASIC20.94■□□□□ 0.94
USP11P51784 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.94■□□□□ 0.94
USP11P51784 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.94■□□□□ 0.94
USP11P51784 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.94■□□□□ 0.94
USP11P51784 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms