Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.35■□□□□ 0.85
KRT9P35527 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.35■□□□□ 0.85
KRT9P35527 AC073195.1-201ENST00000607241 877 ntBASIC20.35■□□□□ 0.85
KRT9P35527 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.35■□□□□ 0.85
KRT9P35527 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 AP000997.3-201ENST00000623333 2250 ntBASIC20.35■□□□□ 0.85
KRT9P35527 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
KRT9P35527 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
KRT9P35527 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.35■□□□□ 0.85
KRT9P35527 AL135905.2-201ENST00000584934 1404 ntBASIC20.35■□□□□ 0.85
KRT9P35527 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT9P35527 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.34■□□□□ 0.85
KRT9P35527 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
KRT9P35527 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
KRT9P35527 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.34■□□□□ 0.85
KRT9P35527 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
KRT9P35527 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.34■□□□□ 0.85
KRT9P35527 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
KRT9P35527 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.34■□□□□ 0.85
KRT9P35527 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT9P35527 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.34■□□□□ 0.85
KRT9P35527 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
KRT9P35527 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
KRT9P35527 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT9P35527 KRT8P32-201ENST00000512863 1461 ntBASIC20.34■□□□□ 0.85
KRT9P35527 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT9P35527 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
KRT9P35527 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 KRT8P11-201ENST00000409686 1436 ntBASIC20.34■□□□□ 0.85
KRT9P35527 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
KRT9P35527 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
KRT9P35527 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT9P35527 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.33■□□□□ 0.85
KRT9P35527 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KRT9P35527 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KRT9P35527 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT9P35527 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.33■□□□□ 0.85
KRT9P35527 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.33■□□□□ 0.85
KRT9P35527 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.33■□□□□ 0.85
KRT9P35527 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KRT9P35527 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
KRT9P35527 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
KRT9P35527 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT9P35527 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.33■□□□□ 0.85
KRT9P35527 AL031985.4-201ENST00000642138 673 ntBASIC20.33■□□□□ 0.85
KRT9P35527 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KRT9P35527 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT9P35527 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KRT9P35527 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRT9P35527 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.33■□□□□ 0.84
KRT9P35527 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRT9P35527 AC135776.1-201ENST00000319817 2481 ntBASIC20.33■□□□□ 0.84
KRT9P35527 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRT9P35527 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
KRT9P35527 AC008764.6-201ENST00000595909 2069 ntBASIC20.33■□□□□ 0.84
KRT9P35527 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRT9P35527 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT9P35527 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT9P35527 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
KRT9P35527 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT9P35527 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT9P35527 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT9P35527 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT9P35527 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT9P35527 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.32■□□□□ 0.84
KRT9P35527 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT9P35527 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT9P35527 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT9P35527 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT9P35527 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT9P35527 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.32■□□□□ 0.84
KRT9P35527 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT9P35527 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
KRT9P35527 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
KRT9P35527 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT9P35527 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT9P35527 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KRT9P35527 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT9P35527 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms