Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL136038.3-201ENST00000561909 1096 ntBASIC20.91■□□□□ 0.94
CIITAP33076 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.91■□□□□ 0.94
CIITAP33076 AL136038.4-201ENST00000603606 1261 ntBASIC20.91■□□□□ 0.94
CIITAP33076 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.91■□□□□ 0.94
CIITAP33076 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CIITAP33076 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.91■□□□□ 0.94
CIITAP33076 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.91■□□□□ 0.94
CIITAP33076 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CIITAP33076 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
CIITAP33076 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CIITAP33076 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CIITAP33076 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CIITAP33076 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CIITAP33076 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CIITAP33076 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CIITAP33076 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CIITAP33076 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CIITAP33076 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CIITAP33076 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CIITAP33076 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CIITAP33076 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CIITAP33076 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.9■□□□□ 0.94
CIITAP33076 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CIITAP33076 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CIITAP33076 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.9■□□□□ 0.94
CIITAP33076 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CIITAP33076 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.9■□□□□ 0.94
CIITAP33076 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.9■□□□□ 0.94
CIITAP33076 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.9■□□□□ 0.94
CIITAP33076 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
CIITAP33076 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CIITAP33076 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CIITAP33076 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
CIITAP33076 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CIITAP33076 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.9■□□□□ 0.94
CIITAP33076 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CIITAP33076 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.9■□□□□ 0.94
CIITAP33076 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
CIITAP33076 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CIITAP33076 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CIITAP33076 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CIITAP33076 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.89■□□□□ 0.93
CIITAP33076 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CIITAP33076 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CIITAP33076 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.89■□□□□ 0.93
CIITAP33076 AC093503.3-201ENST00000624917 2352 ntBASIC20.89■□□□□ 0.93
CIITAP33076 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CIITAP33076 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CIITAP33076 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
CIITAP33076 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CIITAP33076 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.88■□□□□ 0.93
CIITAP33076 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CIITAP33076 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CIITAP33076 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.88■□□□□ 0.93
CIITAP33076 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CIITAP33076 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CIITAP33076 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CIITAP33076 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CIITAP33076 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CIITAP33076 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CIITAP33076 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CIITAP33076 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CIITAP33076 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.88■□□□□ 0.93
CIITAP33076 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CIITAP33076 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.88■□□□□ 0.93
CIITAP33076 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CIITAP33076 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.88■□□□□ 0.93
CIITAP33076 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.88■□□□□ 0.93
CIITAP33076 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
CIITAP33076 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.88■□□□□ 0.93
CIITAP33076 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.88■□□□□ 0.93
CIITAP33076 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CIITAP33076 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CIITAP33076 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CIITAP33076 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CIITAP33076 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.88■□□□□ 0.93
CIITAP33076 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CIITAP33076 SDHAP2-201ENST00000455183 2001 ntBASIC20.88■□□□□ 0.93
CIITAP33076 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CIITAP33076 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.88■□□□□ 0.93
CIITAP33076 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CIITAP33076 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CIITAP33076 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.88■□□□□ 0.93
CIITAP33076 AC009102.3-201ENST00000623118 1491 ntBASIC20.88■□□□□ 0.93
CIITAP33076 AIRN-201ENST00000601203 4374 ntBASIC20.88■□□□□ 0.93
CIITAP33076 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CIITAP33076 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
CIITAP33076 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CIITAP33076 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.87■□□□□ 0.93
CIITAP33076 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.87■□□□□ 0.93
CIITAP33076 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.87■□□□□ 0.93
CIITAP33076 MIR662-201ENST00000384847 95 ntBASIC20.87■□□□□ 0.93
CIITAP33076 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CIITAP33076 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.87■□□□□ 0.93
CIITAP33076 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.87■□□□□ 0.93
CIITAP33076 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
CIITAP33076 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CIITAP33076 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CIITAP33076 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.87■□□□□ 0.93
CIITAP33076 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms