Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
HOXC8P31273 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXC8P31273 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.26■□□□□ 0.83
HOXC8P31273 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.26■□□□□ 0.83
HOXC8P31273 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXC8P31273 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXC8P31273 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.26■□□□□ 0.83
HOXC8P31273 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.26■□□□□ 0.83
HOXC8P31273 BNIP3P18-201ENST00000593976 575 ntBASIC20.26■□□□□ 0.83
HOXC8P31273 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.26■□□□□ 0.83
HOXC8P31273 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXC8P31273 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC8P31273 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.26■□□□□ 0.83
HOXC8P31273 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC8P31273 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC8P31273 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.25■□□□□ 0.83
HOXC8P31273 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC8P31273 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC8P31273 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC8P31273 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC8P31273 SAPCD2P3-201ENST00000455031 850 ntBASIC20.25■□□□□ 0.83
HOXC8P31273 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.25■□□□□ 0.83
HOXC8P31273 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.25■□□□□ 0.83
HOXC8P31273 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC8P31273 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC8P31273 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
HOXC8P31273 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC8P31273 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC8P31273 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.25■□□□□ 0.83
HOXC8P31273 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.24■□□□□ 0.83
HOXC8P31273 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HOXC8P31273 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC8P31273 AL049812.1-201ENST00000432563 2267 ntBASIC20.24■□□□□ 0.83
HOXC8P31273 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.24■□□□□ 0.83
HOXC8P31273 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.24■□□□□ 0.83
HOXC8P31273 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC8P31273 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
HOXC8P31273 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC8P31273 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC8P31273 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC8P31273 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC8P31273 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC8P31273 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC8P31273 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.24■□□□□ 0.83
HOXC8P31273 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC8P31273 MRPL3P1-201ENST00000400109 1033 ntBASIC20.24■□□□□ 0.83
HOXC8P31273 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.24■□□□□ 0.83
HOXC8P31273 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.24■□□□□ 0.83
HOXC8P31273 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.24■□□□□ 0.83
HOXC8P31273 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC8P31273 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HOXC8P31273 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC8P31273 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC8P31273 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC8P31273 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.24■□□□□ 0.83
HOXC8P31273 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC8P31273 AC009102.3-201ENST00000623118 1491 ntBASIC20.24■□□□□ 0.83
HOXC8P31273 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.23■□□□□ 0.83
HOXC8P31273 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC8P31273 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC8P31273 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC8P31273 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC8P31273 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC8P31273 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HOXC8P31273 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.23■□□□□ 0.83
HOXC8P31273 POM121L3P-201ENST00000419331 1163 ntBASIC20.23■□□□□ 0.83
HOXC8P31273 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC8P31273 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXC8P31273 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXC8P31273 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXC8P31273 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.23■□□□□ 0.83
HOXC8P31273 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.23■□□□□ 0.83
HOXC8P31273 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.23■□□□□ 0.83
HOXC8P31273 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.23■□□□□ 0.83
HOXC8P31273 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXC8P31273 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC8P31273 AL662844.1-201ENST00000546340 181 ntBASIC20.23■□□□□ 0.83
HOXC8P31273 AC011840.4-201ENST00000578471 627 ntBASIC20.23■□□□□ 0.83
HOXC8P31273 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HOXC8P31273 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.23■□□□□ 0.83
HOXC8P31273 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC8P31273 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
HOXC8P31273 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC8P31273 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms