Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC22.27■■□□□ 1.16
COL4A5P29400 AL356488.2-201ENST00000602755 427 ntBASIC22.27■■□□□ 1.16
COL4A5P29400 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL4A5P29400 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
COL4A5P29400 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL4A5P29400 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.27■■□□□ 1.16
COL4A5P29400 ZNF259P1-201ENST00000407656 1365 ntBASIC22.27■■□□□ 1.16
COL4A5P29400 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL4A5P29400 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
COL4A5P29400 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
COL4A5P29400 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC22.26■■□□□ 1.15
COL4A5P29400 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC22.26■■□□□ 1.15
COL4A5P29400 AL355385.1-201ENST00000606123 409 ntBASIC22.26■■□□□ 1.15
COL4A5P29400 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A5P29400 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A5P29400 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A5P29400 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
COL4A5P29400 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A5P29400 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.26■■□□□ 1.15
COL4A5P29400 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A5P29400 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A5P29400 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A5P29400 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A5P29400 RPSAP43-201ENST00000402237 625 ntBASIC22.26■■□□□ 1.15
COL4A5P29400 AC098831.1-202ENST00000438821 336 ntBASIC22.26■■□□□ 1.15
COL4A5P29400 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.26■■□□□ 1.15
COL4A5P29400 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
COL4A5P29400 AC112777.1-201ENST00000540175 1423 ntBASIC22.26■■□□□ 1.15
COL4A5P29400 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.26■■□□□ 1.15
COL4A5P29400 AL138831.2-201ENST00000606564 490 ntBASIC22.26■■□□□ 1.15
COL4A5P29400 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A5P29400 FP475955.4-201ENST00000623131 1990 ntBASIC22.26■■□□□ 1.15
COL4A5P29400 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A5P29400 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL4A5P29400 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.25■■□□□ 1.15
COL4A5P29400 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL4A5P29400 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.25■■□□□ 1.15
COL4A5P29400 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL4A5P29400 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
COL4A5P29400 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC22.25■■□□□ 1.15
COL4A5P29400 PMS2P2-201ENST00000425039 1128 ntBASIC22.25■■□□□ 1.15
COL4A5P29400 GPX1P2-201ENST00000429271 606 ntBASIC22.25■■□□□ 1.15
COL4A5P29400 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC22.25■■□□□ 1.15
COL4A5P29400 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC22.25■■□□□ 1.15
COL4A5P29400 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC22.25■■□□□ 1.15
COL4A5P29400 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC22.25■■□□□ 1.15
COL4A5P29400 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL4A5P29400 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.25■■□□□ 1.15
COL4A5P29400 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL4A5P29400 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
COL4A5P29400 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC22.25■■□□□ 1.15
COL4A5P29400 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC22.25■■□□□ 1.15
COL4A5P29400 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC22.25■■□□□ 1.15
COL4A5P29400 INTS4P1-201ENST00000438455 1935 ntBASIC22.24■■□□□ 1.15
COL4A5P29400 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL4A5P29400 HEIH-201ENST00000623091 1652 ntBASIC22.24■■□□□ 1.15
COL4A5P29400 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL4A5P29400 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL4A5P29400 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL4A5P29400 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL4A5P29400 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL4A5P29400 MED15P5-201ENST00000423150 992 ntBASIC22.24■■□□□ 1.15
COL4A5P29400 DDT-206ENST00000430101 573 ntTSL 2 BASIC22.24■■□□□ 1.15
COL4A5P29400 RPS2P1-201ENST00000434010 821 ntBASIC22.24■■□□□ 1.15
COL4A5P29400 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL4A5P29400 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC22.24■■□□□ 1.15
COL4A5P29400 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC22.24■■□□□ 1.15
COL4A5P29400 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC22.24■■□□□ 1.15
COL4A5P29400 AL139424.1-201ENST00000607572 797 ntBASIC22.24■■□□□ 1.15
COL4A5P29400 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC22.24■■□□□ 1.15
COL4A5P29400 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
COL4A5P29400 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC22.24■■□□□ 1.15
COL4A5P29400 UROS-202ENST00000368778 1556 ntTSL 2 BASIC22.24■■□□□ 1.15
COL4A5P29400 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
COL4A5P29400 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.24■■□□□ 1.15
COL4A5P29400 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL4A5P29400 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.24■■□□□ 1.15
COL4A5P29400 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A5P29400 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC22.23■■□□□ 1.15
COL4A5P29400 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A5P29400 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
COL4A5P29400 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A5P29400 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A5P29400 UPF3AP3-201ENST00000420996 769 ntBASIC22.23■■□□□ 1.15
COL4A5P29400 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC22.23■■□□□ 1.15
COL4A5P29400 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC22.23■■□□□ 1.15
COL4A5P29400 AC113404.2-201ENST00000507884 177 ntBASIC22.23■■□□□ 1.15
COL4A5P29400 KRT18P41-201ENST00000518924 1277 ntBASIC22.23■■□□□ 1.15
COL4A5P29400 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC22.23■■□□□ 1.15
COL4A5P29400 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC22.23■■□□□ 1.15
COL4A5P29400 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC22.23■■□□□ 1.15
COL4A5P29400 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A5P29400 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
COL4A5P29400 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A5P29400 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A5P29400 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A5P29400 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A5P29400 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
COL4A5P29400 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC22.23■■□□□ 1.15
COL4A5P29400 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms