Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
EPHA3P29320 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.1■□□□□ 0.49
EPHA3P29320 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHA3P29320 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.1■□□□□ 0.49
EPHA3P29320 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
EPHA3P29320 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHA3P29320 AC112777.1-201ENST00000540175 1423 ntBASIC18.1■□□□□ 0.49
EPHA3P29320 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.1■□□□□ 0.49
EPHA3P29320 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHA3P29320 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHA3P29320 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.1■□□□□ 0.49
EPHA3P29320 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.1■□□□□ 0.49
EPHA3P29320 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
EPHA3P29320 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.1■□□□□ 0.49
EPHA3P29320 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.1■□□□□ 0.49
EPHA3P29320 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
EPHA3P29320 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
EPHA3P29320 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHA3P29320 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
EPHA3P29320 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
EPHA3P29320 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.1■□□□□ 0.49
EPHA3P29320 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHA3P29320 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
EPHA3P29320 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EPHA3P29320 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHA3P29320 GNAS-203ENST00000306120 1878 ntBASIC18.09■□□□□ 0.49
EPHA3P29320 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
EPHA3P29320 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EPHA3P29320 AC138028.4-201ENST00000564984 1845 ntBASIC18.09■□□□□ 0.49
EPHA3P29320 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
EPHA3P29320 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EPHA3P29320 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EPHA3P29320 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.09■□□□□ 0.49
EPHA3P29320 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHA3P29320 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.09■□□□□ 0.49
EPHA3P29320 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHA3P29320 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EPHA3P29320 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.09■□□□□ 0.49
EPHA3P29320 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.09■□□□□ 0.49
EPHA3P29320 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHA3P29320 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.09■□□□□ 0.49
EPHA3P29320 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.09■□□□□ 0.49
EPHA3P29320 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
EPHA3P29320 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.09■□□□□ 0.49
EPHA3P29320 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.09■□□□□ 0.49
EPHA3P29320 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.09■□□□□ 0.49
EPHA3P29320 REXO1L9P-201ENST00000604264 2108 ntBASIC18.09■□□□□ 0.49
EPHA3P29320 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHA3P29320 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.09■□□□□ 0.49
EPHA3P29320 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.09■□□□□ 0.49
EPHA3P29320 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EPHA3P29320 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EPHA3P29320 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EPHA3P29320 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
EPHA3P29320 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EPHA3P29320 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
EPHA3P29320 KRT8P45-201ENST00000414328 1447 ntBASIC18.08■□□□□ 0.49
EPHA3P29320 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
EPHA3P29320 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
EPHA3P29320 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA3P29320 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA3P29320 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
EPHA3P29320 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.08■□□□□ 0.48
EPHA3P29320 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA3P29320 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.08■□□□□ 0.48
EPHA3P29320 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA3P29320 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA3P29320 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
EPHA3P29320 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.08■□□□□ 0.48
EPHA3P29320 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.08■□□□□ 0.48
EPHA3P29320 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA3P29320 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.08■□□□□ 0.48
EPHA3P29320 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.08■□□□□ 0.48
EPHA3P29320 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.08■□□□□ 0.48
EPHA3P29320 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.08■□□□□ 0.48
EPHA3P29320 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA3P29320 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA3P29320 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.08■□□□□ 0.48
EPHA3P29320 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA3P29320 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA3P29320 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.08■□□□□ 0.48
EPHA3P29320 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
EPHA3P29320 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.08■□□□□ 0.48
EPHA3P29320 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 KRT8P3-201ENST00000519669 1449 ntBASIC18.07■□□□□ 0.48
EPHA3P29320 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
EPHA3P29320 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.07■□□□□ 0.48
EPHA3P29320 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.07■□□□□ 0.48
EPHA3P29320 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.07■□□□□ 0.48
EPHA3P29320 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 AC069152.1-201ENST00000438030 544 ntBASIC18.07■□□□□ 0.48
EPHA3P29320 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms