Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NR4A1P22736 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR4A1P22736 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.26■□□□□ 0.35
NR4A1P22736 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.26■□□□□ 0.35
NR4A1P22736 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.26■□□□□ 0.35
NR4A1P22736 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.26■□□□□ 0.35
NR4A1P22736 AC073648.6-201ENST00000641589 218 ntBASIC17.26■□□□□ 0.35
NR4A1P22736 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR4A1P22736 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR4A1P22736 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR4A1P22736 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR4A1P22736 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NR4A1P22736 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.26■□□□□ 0.35
NR4A1P22736 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.26■□□□□ 0.35
NR4A1P22736 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR4A1P22736 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR4A1P22736 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR4A1P22736 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.26■□□□□ 0.35
NR4A1P22736 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NR4A1P22736 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR4A1P22736 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NR4A1P22736 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR4A1P22736 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR4A1P22736 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR4A1P22736 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.26■□□□□ 0.35
NR4A1P22736 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NR4A1P22736 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.26■□□□□ 0.35
NR4A1P22736 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NR4A1P22736 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.25■□□□□ 0.35
NR4A1P22736 PHGDH-210ENST00000641115 1638 ntBASIC17.25■□□□□ 0.35
NR4A1P22736 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NR4A1P22736 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.25■□□□□ 0.35
NR4A1P22736 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.25■□□□□ 0.35
NR4A1P22736 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 ANO7L1-203ENST00000602586 1720 ntBASIC17.25■□□□□ 0.35
NR4A1P22736 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.25■□□□□ 0.35
NR4A1P22736 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NR4A1P22736 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NR4A1P22736 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.25■□□□□ 0.35
NR4A1P22736 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.25■□□□□ 0.35
NR4A1P22736 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.25■□□□□ 0.35
NR4A1P22736 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.25■□□□□ 0.35
NR4A1P22736 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NR4A1P22736 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NR4A1P22736 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.25■□□□□ 0.35
NR4A1P22736 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NR4A1P22736 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR4A1P22736 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.25■□□□□ 0.35
NR4A1P22736 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NR4A1P22736 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.24■□□□□ 0.35
NR4A1P22736 IRX1P1-201ENST00000438849 1838 ntBASIC17.24■□□□□ 0.35
NR4A1P22736 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.24■□□□□ 0.35
NR4A1P22736 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.24■□□□□ 0.35
NR4A1P22736 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NR4A1P22736 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NR4A1P22736 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NR4A1P22736 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.24■□□□□ 0.35
NR4A1P22736 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.24■□□□□ 0.35
NR4A1P22736 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.24■□□□□ 0.35
NR4A1P22736 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
NR4A1P22736 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.24■□□□□ 0.35
NR4A1P22736 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.24■□□□□ 0.35
NR4A1P22736 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
NR4A1P22736 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.24■□□□□ 0.35
NR4A1P22736 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 AC134043.2-201ENST00000624206 2238 ntBASIC17.24■□□□□ 0.35
NR4A1P22736 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms