Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 NIFKP9-201ENST00000419265 221 ntBASIC17.28■□□□□ 0.36
TNFRSF1BP20333 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.28■□□□□ 0.36
TNFRSF1BP20333 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 ESPNP-201ENST00000270691 2015 ntBASIC17.28■□□□□ 0.36
TNFRSF1BP20333 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF1BP20333 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 RCC2P3-201ENST00000418112 1537 ntBASIC17.27■□□□□ 0.36
TNFRSF1BP20333 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 PRSS44-201ENST00000515154 1146 ntBASIC17.27■□□□□ 0.36
TNFRSF1BP20333 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF1BP20333 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF1BP20333 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.27■□□□□ 0.35
TNFRSF1BP20333 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF1BP20333 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF1BP20333 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF1BP20333 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF1BP20333 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF1BP20333 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF1BP20333 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF1BP20333 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF1BP20333 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF1BP20333 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF1BP20333 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 AC008040.2-201ENST00000461049 708 ntBASIC17.26■□□□□ 0.35
TNFRSF1BP20333 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 AC110285.5-201ENST00000611501 352 ntBASIC17.26■□□□□ 0.35
TNFRSF1BP20333 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms