Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
VCLP18206 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
VCLP18206 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.68■□□□□ 0.58
VCLP18206 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.68■□□□□ 0.58
VCLP18206 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.68■□□□□ 0.58
VCLP18206 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.68■□□□□ 0.58
VCLP18206 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.68■□□□□ 0.58
VCLP18206 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.68■□□□□ 0.58
VCLP18206 AC005363.2-201ENST00000618631 242 ntBASIC18.68■□□□□ 0.58
VCLP18206 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.68■□□□□ 0.58
VCLP18206 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.68■□□□□ 0.58
VCLP18206 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.68■□□□□ 0.58
VCLP18206 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.68■□□□□ 0.58
VCLP18206 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.68■□□□□ 0.58
VCLP18206 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VCLP18206 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.67■□□□□ 0.58
VCLP18206 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VCLP18206 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VCLP18206 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VCLP18206 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.67■□□□□ 0.58
VCLP18206 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.67■□□□□ 0.58
VCLP18206 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.67■□□□□ 0.58
VCLP18206 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.67■□□□□ 0.58
VCLP18206 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.67■□□□□ 0.58
VCLP18206 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.67■□□□□ 0.58
VCLP18206 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.67■□□□□ 0.58
VCLP18206 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
VCLP18206 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.67■□□□□ 0.58
VCLP18206 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.67■□□□□ 0.58
VCLP18206 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VCLP18206 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.67■□□□□ 0.58
VCLP18206 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VCLP18206 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VCLP18206 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VCLP18206 AC006333.2-201ENST00000607957 2099 ntBASIC18.67■□□□□ 0.58
VCLP18206 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.67■□□□□ 0.58
VCLP18206 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VCLP18206 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
VCLP18206 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.66■□□□□ 0.58
VCLP18206 AC010653.2-201ENST00000623505 997 ntBASIC18.66■□□□□ 0.58
VCLP18206 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.66■□□□□ 0.58
VCLP18206 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.66■□□□□ 0.58
VCLP18206 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCLP18206 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.66■□□□□ 0.58
VCLP18206 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCLP18206 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
VCLP18206 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.65■□□□□ 0.58
VCLP18206 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VCLP18206 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCLP18206 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCLP18206 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VCLP18206 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.65■□□□□ 0.58
VCLP18206 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.65■□□□□ 0.58
VCLP18206 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
VCLP18206 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCLP18206 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.65■□□□□ 0.58
VCLP18206 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.65■□□□□ 0.58
VCLP18206 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.65■□□□□ 0.58
VCLP18206 AL512604.3-201ENST00000569583 964 ntBASIC18.65■□□□□ 0.58
VCLP18206 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms