Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFRAP16234 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFRAP16234 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFRAP16234 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFRAP16234 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PDGFRAP16234 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFRAP16234 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFRAP16234 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFRAP16234 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.49■□□□□ 0.71
PDGFRAP16234 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFRAP16234 TERF1P1-201ENST00000311003 1181 ntBASIC19.49■□□□□ 0.71
PDGFRAP16234 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFRAP16234 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFRAP16234 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.49■□□□□ 0.71
PDGFRAP16234 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.49■□□□□ 0.71
PDGFRAP16234 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PDGFRAP16234 RN7SL850P-201ENST00000579959 291 ntBASIC19.49■□□□□ 0.71
PDGFRAP16234 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFRAP16234 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PDGFRAP16234 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFRAP16234 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFRAP16234 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFRAP16234 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFRAP16234 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.49■□□□□ 0.71
PDGFRAP16234 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.48■□□□□ 0.71
PDGFRAP16234 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFRAP16234 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFRAP16234 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFRAP16234 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFRAP16234 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFRAP16234 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
PDGFRAP16234 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFRAP16234 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFRAP16234 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.48■□□□□ 0.71
PDGFRAP16234 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.48■□□□□ 0.71
PDGFRAP16234 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.48■□□□□ 0.71
PDGFRAP16234 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
PDGFRAP16234 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.48■□□□□ 0.71
PDGFRAP16234 KRT18P41-201ENST00000518924 1277 ntBASIC19.48■□□□□ 0.71
PDGFRAP16234 AC010203.1-204ENST00000548782 407 ntBASIC19.48■□□□□ 0.71
PDGFRAP16234 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFRAP16234 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.48■□□□□ 0.71
PDGFRAP16234 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFRAP16234 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFRAP16234 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.48■□□□□ 0.71
PDGFRAP16234 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFRAP16234 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFRAP16234 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.48■□□□□ 0.71
PDGFRAP16234 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PDGFRAP16234 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.48■□□□□ 0.71
PDGFRAP16234 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
PDGFRAP16234 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.48■□□□□ 0.71
PDGFRAP16234 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFRAP16234 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFRAP16234 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFRAP16234 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFRAP16234 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFRAP16234 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFRAP16234 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFRAP16234 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.47■□□□□ 0.71
PDGFRAP16234 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFRAP16234 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFRAP16234 AC073592.3-201ENST00000625118 1834 ntBASIC19.47■□□□□ 0.71
PDGFRAP16234 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.47■□□□□ 0.71
PDGFRAP16234 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFRAP16234 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PDGFRAP16234 TMPOP1-202ENST00000424642 1267 ntBASIC19.47■□□□□ 0.71
PDGFRAP16234 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.47■□□□□ 0.71
PDGFRAP16234 WWOX-216ENST00000569818 525 ntBASIC19.47■□□□□ 0.71
PDGFRAP16234 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFRAP16234 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFRAP16234 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PDGFRAP16234 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFRAP16234 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.47■□□□□ 0.71
PDGFRAP16234 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFRAP16234 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFRAP16234 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFRAP16234 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFRAP16234 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.47■□□□□ 0.71
PDGFRAP16234 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFRAP16234 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PDGFRAP16234 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
PDGFRAP16234 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFRAP16234 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFRAP16234 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFRAP16234 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFRAP16234 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.46■□□□□ 0.71
PDGFRAP16234 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.46■□□□□ 0.71
PDGFRAP16234 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFRAP16234 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFRAP16234 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.46■□□□□ 0.71
PDGFRAP16234 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFRAP16234 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
PDGFRAP16234 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFRAP16234 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.46■□□□□ 0.71
PDGFRAP16234 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.46■□□□□ 0.71
PDGFRAP16234 HMGA1P5-201ENST00000412453 271 ntBASIC19.46■□□□□ 0.71
PDGFRAP16234 LIN28AP1-201ENST00000429574 405 ntBASIC19.46■□□□□ 0.71
PDGFRAP16234 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.46■□□□□ 0.71
PDGFRAP16234 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms