Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCG2P13521 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCG2P13521 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCG2P13521 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.37■■□□□ 1.01
SCG2P13521 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCG2P13521 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.37■■□□□ 1.01
SCG2P13521 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.37■■□□□ 1.01
SCG2P13521 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCG2P13521 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCG2P13521 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCG2P13521 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.37■■□□□ 1.01
SCG2P13521 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCG2P13521 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.37■■□□□ 1.01
SCG2P13521 AC140113.3-201ENST00000605663 199 ntBASIC21.37■■□□□ 1.01
SCG2P13521 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCG2P13521 AC011558.1-201ENST00000623459 338 ntBASIC21.37■■□□□ 1.01
SCG2P13521 AL031432.5-201ENST00000641059 760 ntBASIC21.37■■□□□ 1.01
SCG2P13521 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCG2P13521 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.37■■□□□ 1.01
SCG2P13521 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.37■■□□□ 1.01
SCG2P13521 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
SCG2P13521 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCG2P13521 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SCG2P13521 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SCG2P13521 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
SCG2P13521 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCG2P13521 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SCG2P13521 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCG2P13521 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCG2P13521 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.36■■□□□ 1.01
SCG2P13521 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
SCG2P13521 AC104076.2-201ENST00000448912 469 ntBASIC21.36■■□□□ 1.01
SCG2P13521 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.36■■□□□ 1.01
SCG2P13521 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
SCG2P13521 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.36■■□□□ 1.01
SCG2P13521 AC010240.3-201ENST00000607688 395 ntBASIC21.36■■□□□ 1.01
SCG2P13521 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SCG2P13521 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.36■■□□□ 1.01
SCG2P13521 AC073592.3-201ENST00000625118 1834 ntBASIC21.36■■□□□ 1.01
SCG2P13521 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCG2P13521 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SCG2P13521 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
SCG2P13521 AC005082.1-201ENST00000413042 2259 ntBASIC21.35■■□□□ 1.01
SCG2P13521 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.35■■□□□ 1.01
SCG2P13521 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
SCG2P13521 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCG2P13521 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SCG2P13521 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SCG2P13521 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCG2P13521 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SCG2P13521 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
SCG2P13521 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.35■■□□□ 1.01
SCG2P13521 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.35■■□□□ 1.01
SCG2P13521 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.35■■□□□ 1.01
SCG2P13521 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SCG2P13521 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCG2P13521 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCG2P13521 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SCG2P13521 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCG2P13521 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCG2P13521 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SCG2P13521 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SCG2P13521 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCG2P13521 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SCG2P13521 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCG2P13521 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCG2P13521 AL163051.1-201ENST00000569214 1512 ntBASIC21.34■■□□□ 1.01
SCG2P13521 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SCG2P13521 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SCG2P13521 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
SCG2P13521 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.34■■□□□ 1.01
SCG2P13521 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SCG2P13521 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SCG2P13521 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCG2P13521 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SCG2P13521 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCG2P13521 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.34■■□□□ 1.01
SCG2P13521 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.34■■□□□ 1.01
SCG2P13521 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.34■■□□□ 1.01
SCG2P13521 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.34■■□□□ 1.01
SCG2P13521 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.34■■□□□ 1.01
SCG2P13521 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.34■■□□□ 1.01
SCG2P13521 MIR3180-4-201ENST00000582223 153 ntBASIC21.34■■□□□ 1.01
SCG2P13521 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.34■■□□□ 1.01
SCG2P13521 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.34■■□□□ 1.01
SCG2P13521 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SCG2P13521 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
SCG2P13521 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.34■■□□□ 1.01
SCG2P13521 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCG2P13521 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.34■■□□□ 1.01
SCG2P13521 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SCG2P13521 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SCG2P13521 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCG2P13521 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCG2P13521 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCG2P13521 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.34■■□□□ 1.01
SCG2P13521 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCG2P13521 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.34■■□□□ 1.01
SCG2P13521 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCG2P13521 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms