Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBL4AP11441 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.2■□□□□ 0.34
UBL4AP11441 FITM1-202ENST00000559294 800 ntBASIC17.2■□□□□ 0.34
UBL4AP11441 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.2■□□□□ 0.34
UBL4AP11441 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.2■□□□□ 0.34
UBL4AP11441 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBL4AP11441 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
UBL4AP11441 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.2■□□□□ 0.34
UBL4AP11441 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBL4AP11441 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.19■□□□□ 0.34
UBL4AP11441 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
UBL4AP11441 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBL4AP11441 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBL4AP11441 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
UBL4AP11441 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.19■□□□□ 0.34
UBL4AP11441 AL390955.1-201ENST00000428694 934 ntBASIC17.19■□□□□ 0.34
UBL4AP11441 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.19■□□□□ 0.34
UBL4AP11441 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBL4AP11441 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBL4AP11441 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBL4AP11441 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
UBL4AP11441 MTMR9LP-203ENST00000426597 1545 ntBASIC17.19■□□□□ 0.34
UBL4AP11441 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBL4AP11441 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
UBL4AP11441 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBL4AP11441 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBL4AP11441 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.19■□□□□ 0.34
UBL4AP11441 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.19■□□□□ 0.34
UBL4AP11441 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.19■□□□□ 0.34
UBL4AP11441 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBL4AP11441 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
UBL4AP11441 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.19■□□□□ 0.34
UBL4AP11441 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.19■□□□□ 0.34
UBL4AP11441 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBL4AP11441 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
UBL4AP11441 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
UBL4AP11441 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBL4AP11441 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBL4AP11441 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBL4AP11441 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBL4AP11441 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.18■□□□□ 0.34
UBL4AP11441 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.18■□□□□ 0.34
UBL4AP11441 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.18■□□□□ 0.34
UBL4AP11441 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBL4AP11441 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
UBL4AP11441 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
UBL4AP11441 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBL4AP11441 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.18■□□□□ 0.34
UBL4AP11441 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBL4AP11441 AC008622.2-201ENST00000617006 1229 ntBASIC17.18■□□□□ 0.34
UBL4AP11441 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
UBL4AP11441 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBL4AP11441 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
UBL4AP11441 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBL4AP11441 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.18■□□□□ 0.34
UBL4AP11441 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.18■□□□□ 0.34
UBL4AP11441 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBL4AP11441 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBL4AP11441 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.17■□□□□ 0.34
UBL4AP11441 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBL4AP11441 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.17■□□□□ 0.34
UBL4AP11441 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBL4AP11441 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBL4AP11441 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBL4AP11441 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBL4AP11441 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.17■□□□□ 0.34
UBL4AP11441 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBL4AP11441 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.17■□□□□ 0.34
UBL4AP11441 SLC25A1P2-201ENST00000430693 912 ntBASIC17.17■□□□□ 0.34
UBL4AP11441 MCCD1P1-208ENST00000445732 328 ntBASIC17.17■□□□□ 0.34
UBL4AP11441 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.17■□□□□ 0.34
UBL4AP11441 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBL4AP11441 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
UBL4AP11441 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.17■□□□□ 0.34
UBL4AP11441 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.17■□□□□ 0.34
UBL4AP11441 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UBL4AP11441 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBL4AP11441 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBL4AP11441 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
UBL4AP11441 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBL4AP11441 AC099398.1-201ENST00000567919 2776 ntBASIC17.17■□□□□ 0.34
UBL4AP11441 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.16■□□□□ 0.34
UBL4AP11441 AL109659.2-201ENST00000606809 1674 ntBASIC17.16■□□□□ 0.34
UBL4AP11441 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBL4AP11441 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBL4AP11441 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBL4AP11441 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBL4AP11441 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBL4AP11441 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
UBL4AP11441 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBL4AP11441 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBL4AP11441 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.16■□□□□ 0.34
UBL4AP11441 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.16■□□□□ 0.34
UBL4AP11441 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBL4AP11441 AL023284.2-201ENST00000405850 579 ntBASIC17.16■□□□□ 0.34
UBL4AP11441 AL596275.1-201ENST00000423464 877 ntBASIC17.16■□□□□ 0.34
UBL4AP11441 CCR12P-201ENST00000446203 998 ntBASIC17.16■□□□□ 0.34
UBL4AP11441 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.16■□□□□ 0.34
UBL4AP11441 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
UBL4AP11441 C2orf69P3-201ENST00000565542 1120 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms