Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.82■■□□□ 1.08
TOP1P11387 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TOP1P11387 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TOP1P11387 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TOP1P11387 AC093503.3-201ENST00000624917 2352 ntBASIC21.82■■□□□ 1.08
TOP1P11387 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TOP1P11387 AC034236.2-201ENST00000606662 1610 ntBASIC21.82■■□□□ 1.08
TOP1P11387 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TOP1P11387 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TOP1P11387 SPDYE15P-201ENST00000424157 909 ntBASIC21.82■■□□□ 1.08
TOP1P11387 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TOP1P11387 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TOP1P11387 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.82■■□□□ 1.08
TOP1P11387 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TOP1P11387 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TOP1P11387 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.82■■□□□ 1.08
TOP1P11387 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TOP1P11387 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.82■■□□□ 1.08
TOP1P11387 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TOP1P11387 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TOP1P11387 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.82■■□□□ 1.08
TOP1P11387 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.82■■□□□ 1.08
TOP1P11387 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TOP1P11387 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
TOP1P11387 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TOP1P11387 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TOP1P11387 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TOP1P11387 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TOP1P11387 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TOP1P11387 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TOP1P11387 MTMR9LP-203ENST00000426597 1545 ntBASIC21.81■■□□□ 1.08
TOP1P11387 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TOP1P11387 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TOP1P11387 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TOP1P11387 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TOP1P11387 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.81■■□□□ 1.08
TOP1P11387 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.81■■□□□ 1.08
TOP1P11387 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
TOP1P11387 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.81■■□□□ 1.08
TOP1P11387 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TOP1P11387 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TOP1P11387 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TOP1P11387 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TOP1P11387 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TOP1P11387 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TOP1P11387 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TOP1P11387 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TOP1P11387 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP1P11387 AL357033.4-201ENST00000617703 1807 ntBASIC21.8■■□□□ 1.08
TOP1P11387 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP1P11387 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TOP1P11387 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP1P11387 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP1P11387 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP1P11387 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
TOP1P11387 AC006333.2-201ENST00000607957 2099 ntBASIC21.8■■□□□ 1.08
TOP1P11387 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP1P11387 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP1P11387 AL671277.2-201ENST00000458060 996 ntBASIC21.8■■□□□ 1.08
TOP1P11387 AC034232.1-201ENST00000506026 1064 ntBASIC21.8■■□□□ 1.08
TOP1P11387 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.8■■□□□ 1.08
TOP1P11387 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.8■■□□□ 1.08
TOP1P11387 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
TOP1P11387 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TOP1P11387 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.8■■□□□ 1.08
TOP1P11387 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TOP1P11387 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.8■■□□□ 1.08
TOP1P11387 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
TOP1P11387 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TOP1P11387 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP1P11387 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP1P11387 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
TOP1P11387 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TOP1P11387 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.8■■□□□ 1.08
TOP1P11387 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TOP1P11387 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.79■■□□□ 1.08
TOP1P11387 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.79■■□□□ 1.08
TOP1P11387 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TOP1P11387 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TOP1P11387 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TOP1P11387 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TOP1P11387 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TOP1P11387 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TOP1P11387 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TOP1P11387 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TOP1P11387 RASA4DP-201ENST00000460726 1199 ntBASIC21.79■■□□□ 1.08
TOP1P11387 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.79■■□□□ 1.08
TOP1P11387 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.79■■□□□ 1.08
TOP1P11387 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.79■■□□□ 1.08
TOP1P11387 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TOP1P11387 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.79■■□□□ 1.08
TOP1P11387 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.79■■□□□ 1.08
TOP1P11387 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TOP1P11387 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TOP1P11387 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
TOP1P11387 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TOP1P11387 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TOP1P11387 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.79■■□□□ 1.08
TOP1P11387 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.79■■□□□ 1.08
TOP1P11387 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms