Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LINC01126-201ENST00000623515 1646 ntBASIC14.43□□□□□ -0.1
CXCL1P09341 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL1P09341 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CXCL1P09341 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL1P09341 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL1P09341 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CXCL1P09341 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CXCL1P09341 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL1P09341 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL1P09341 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CXCL1P09341 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCL1P09341 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.42□□□□□ -0.1
CXCL1P09341 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.42□□□□□ -0.1
CXCL1P09341 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CXCL1P09341 AC092850.2-201ENST00000623821 2697 ntBASIC14.42□□□□□ -0.1
CXCL1P09341 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CXCL1P09341 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCL1P09341 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCL1P09341 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CXCL1P09341 DOC2GP-204ENST00000639052 2548 ntBASIC14.42□□□□□ -0.1
CXCL1P09341 AL121761.2-201ENST00000598007 1648 ntBASIC14.42□□□□□ -0.1
CXCL1P09341 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CXCL1P09341 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.42□□□□□ -0.1
CXCL1P09341 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.42□□□□□ -0.1
CXCL1P09341 AC023632.3-201ENST00000521633 145 ntBASIC14.42□□□□□ -0.1
CXCL1P09341 AC105020.6-201ENST00000621523 1217 ntBASIC14.42□□□□□ -0.1
CXCL1P09341 AC083906.6-201ENST00000641366 219 ntBASIC14.42□□□□□ -0.1
CXCL1P09341 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CXCL1P09341 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CXCL1P09341 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CXCL1P09341 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.42□□□□□ -0.1
CXCL1P09341 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CXCL1P09341 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.42□□□□□ -0.1
CXCL1P09341 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL1P09341 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
CXCL1P09341 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CXCL1P09341 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL1P09341 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL1P09341 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.41□□□□□ -0.1
CXCL1P09341 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CXCL1P09341 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.41□□□□□ -0.1
CXCL1P09341 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 PKD1P1-201ENST00000458669 6805 ntBASIC14.41□□□□□ -0.1
CXCL1P09341 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CXCL1P09341 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 AC010536.3-201ENST00000620306 533 ntBASIC14.41□□□□□ -0.1
CXCL1P09341 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CXCL1P09341 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL1P09341 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
CXCL1P09341 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.41□□□□□ -0.1
CXCL1P09341 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.41□□□□□ -0.1
CXCL1P09341 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.41□□□□□ -0.1
CXCL1P09341 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CXCL1P09341 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.41□□□□□ -0.1
CXCL1P09341 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CXCL1P09341 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL1P09341 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.4□□□□□ -0.1
CXCL1P09341 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms